RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 C1orf53Q5VUE5 145 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 TRNP1Q6NT89 227 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 FRA10AC1Q70Z53 315 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 CYS1Q717R9 158 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 TMEM143Q96AN5 459 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 PPP1R16BQ96T49 567 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 ACO2Q99798 780 aaKnown RBP10.89□□□□□ -0.67
SND1-201ENST00000354725 C16orf70Q9BSU1 422 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 DCUN1D5Q9BTE7 237 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 TRIT1Q9H3H1 467 aaKnown RBP10.89□□□□□ -0.67
SND1-201ENST00000354725 FBXO6Q9NRD1 293 aaPredicted RBP10.89□□□□□ -0.67
SND1-201ENST00000354725 RAB19A4D1S5 217 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 MAFO75444 373 aaPredicted RBP10.89□□□□□ -0.67
SND1-201ENST00000354725 TRUB2O95900 331 aaKnown RBP10.89□□□□□ -0.67
SND1-201ENST00000354725 MMP3P08254 477 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 ZNF23P17027 643 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 ALDH3B2P48448 385 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 BMXP51813 675 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 HSDL1Q3SXM5 330 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 FAM26DQ5JW98 314 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 AGMOQ6ZNB7 445 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 ZNF534Q76KX8 674 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 TERB1Q8NA31 727 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 OR10Z1Q8NGY1 313 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 FAF2Q96CS3 445 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 GCNAQ96QF7 691 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 MROQ9BYG7 248 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 FRMD8Q9BZ67 464 aaPredicted RBP10.89□□□□□ -0.67
SND1-201ENST00000354725 IFT22Q9H7X7 185 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 BCAP29Q9UHQ4 241 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 DAPK2Q9UIK4 370 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 CDH7Q9ULB5 785 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 PLLPQ9Y342 182 aa10.89□□□□□ -0.67
SND1-201ENST00000354725 VSTM5A8MXK1 200 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 K7ERI5 159 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 GREM1O60565 184 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 PRDX6P30041 224 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 CPOXP36551 454 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 GPD2P43304 727 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 SLC9A3P48764 834 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 KYAT3Q6YP21 454 aaKnown RBP10.88□□□□□ -0.67
SND1-201ENST00000354725 TIFABQ6ZNK6 161 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 KBTBD7Q8WVZ9 684 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 TP53INP1Q96A56 240 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 INTS12Q96CB8 462 aaKnown RBP10.88□□□□□ -0.67
SND1-201ENST00000354725 NRBF2Q96F24 287 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 CPXM1Q96SM3 734 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 TM9SF2Q99805 663 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 Q9H521 79 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 SYTL2Q9HCH5 934 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 SNTG2Q9NY99 539 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 SNX8Q9Y5X2 465 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 TRIP11Q15643 1979 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 ATP6V1G2-DDX39BF2Z307 99 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 CACNB4O00305 520 aaPredicted RBP10.88□□□□□ -0.67
SND1-201ENST00000354725 TRDMT1O14717 391 aaKnown RBP10.88□□□□□ -0.67
SND1-201ENST00000354725 YKT6O15498 198 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 DNAJA2O60884 412 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 TOM1L1O75674 476 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 APBB3O95704 486 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 ERBB2P04626 1255 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 ATF6P18850 670 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 ELK3P41970 407 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 YWHAEP62258 255 aaKnown RBP10.88□□□□□ -0.67
SND1-201ENST00000354725 YWHAZP63104 245 aaKnown RBP10.88□□□□□ -0.67
SND1-201ENST00000354725 PRKCQQ04759 706 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 FAAP100Q0VG06 881 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 OVGP1Q12889 678 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 TTLL4Q14679 1199 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 SETMARQ53H47 684 aaPredicted RBP10.88□□□□□ -0.67
SND1-201ENST00000354725 METTL7BQ6UX53 244 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 RNF111Q6ZNA4 994 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 ARHGAP36Q6ZRI8 547 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 AMIGO2Q86SJ2 522 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 TTC7BQ86TV6 843 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 PRPF39Q86UA1 669 aaKnown RBP10.88□□□□□ -0.67
SND1-201ENST00000354725 TLK2Q86UE8 772 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 HID1Q8IV36 788 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 POU5F2Q8N7G0 328 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 TRUB1Q8WWH5 349 aaKnown RBP10.88□□□□□ -0.67
SND1-201ENST00000354725 RASSF5Q8WWW0 418 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 CDK5RAP1Q96SZ6 601 aaKnown RBP10.88□□□□□ -0.67
SND1-201ENST00000354725 AKAP7Q9P0M2 348 aaPredicted RBP10.88□□□□□ -0.67
SND1-201ENST00000354725 ADAMTS6Q9UKP5 1117 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 SOX13Q9UN79 622 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 KBTBD13C9JR72 458 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 SLC9A3R1O14745 358 aaPredicted RBP10.88□□□□□ -0.67
SND1-201ENST00000354725 LPXNO60711 386 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 LTA4HP09960 611 aaKnown RBP10.88□□□□□ -0.67
SND1-201ENST00000354725 TXNP10599 105 aaKnown RBP10.88□□□□□ -0.67
SND1-201ENST00000354725 GJC1P36383 396 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 PURAQ00577 322 aaKnown RBP10.88□□□□□ -0.67
SND1-201ENST00000354725 RUNX1T1Q06455 604 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 HIC1Q14526 733 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 SNAP47Q5SQN1 464 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 GALNT5Q7Z7M9 940 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 EXT2Q93063 718 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 ZUFSPQ96AP4 578 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 OMA1Q96E52 524 aa10.88□□□□□ -0.67
SND1-201ENST00000354725 NMUR2Q9GZQ4 415 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms