RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 ARHGAP22Q7Z5H3 698 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 TCEAL8Q8IYN2 117 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 HS6ST3Q8IZP7 471 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 MARVELD2Q8N4S9 558 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 ACVR1CQ8NER5 493 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 OR52K1Q8NGK4 314 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 SLC22A17Q8WUG5 538 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 EZH1Q92800 747 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-204ENST00000353317 MYRFLQ96LU7 910 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 AGAP3Q96P47 875 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 VANGL2Q9ULK5 521 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 INSL5Q9Y5Q6 135 aa8.67□□□□□ -1.02
TRIM55-204ENST00000353317 E9PAM4 449 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 NEMP1O14524 444 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 PRRG1O14668 218 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 GRM6O15303 877 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 DENRO43583 198 aaKnown RBP8.66□□□□□ -1.02
TRIM55-204ENST00000353317 TFAP2AP05549 437 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 GJA1P17302 382 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 PIK3R1P27986 724 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 EPHA3P29320 983 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 PMLP29590 882 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 HOXC13P31276 330 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 SLC6A4P31645 630 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 PBX2P40425 430 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 CCR10P46092 362 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 SERPINB8P50452 374 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 THOP1P52888 689 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 LIMK2P53671 638 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 RPL26P61254 145 aaKnown RBP8.66□□□□□ -1.02
TRIM55-204ENST00000353317 MRPS22P82650 360 aaKnown RBP8.66□□□□□ -1.02
TRIM55-204ENST00000353317 GK3PQ14409 553 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 SHHQ15465 462 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 SPANXN3Q5MJ09 141 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 BRMS1LQ5PSV4 323 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 ARMC3Q5W041 872 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 PSRC1Q6PGN9 363 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-204ENST00000353317 POTEHQ6S545 545 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 GAREM2Q75VX8 874 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 CLEC14AQ86T13 490 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 SNX32Q86XE0 403 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 DSELQ8IZU8 1212 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 B4GALNT2Q8NHY0 566 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 PIP4K2CQ8TBX8 421 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 ZNF669Q96BR6 464 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-204ENST00000353317 ZNF512Q96ME7 567 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-204ENST00000353317 PRICKLE1Q96MT3 831 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-204ENST00000353317 SERPINB11Q96P15 392 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 KLHL5Q96PQ7 755 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 TCF25Q9BQ70 676 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 GATA5Q9BWX5 397 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-204ENST00000353317 LRRC3Q9BY71 257 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 C6orf203Q9P0P8 240 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-204ENST00000353317 FNIP2Q9P278 1114 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 ZCWPW2A0A1B0GU75 182 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 RGSL1A5PLK6 1076 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 MATN2O00339 956 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 TRIM13O60858 407 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 F11P03951 625 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 C2P06681 752 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 XRCC1P18887 633 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-204ENST00000353317 MPSTP25325 297 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 CTNNB1P35222 781 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 SPRP35270 261 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-204ENST00000353317 SGSHP51688 502 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 PGGT1BP53609 377 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 ZBTB17Q13105 803 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 TRIP4Q15650 581 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-204ENST00000353317 CNGA3Q16281 694 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 LSM12Q3MHD2 195 aaKnown RBP8.66□□□□□ -1.02
TRIM55-204ENST00000353317 HSP90AA5PQ58FG0 334 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 PLPP4Q5VZY2 271 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 RAP1GAP2Q684P5 730 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 FBXL22Q6P050 247 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 PID1Q7Z2X4 250 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 TMEM135Q86UB9 458 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 METTL25Q8N6Q8 603 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 RNF148Q8N7C7 305 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 DRAXINQ8NBI3 349 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-204ENST00000353317 OR52K2Q8NGK3 314 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 ADAMTS19Q8TE59 1207 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 POF1BQ8WVV4 589 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 DGCR14Q96DF8 476 aaKnown RBP8.66□□□□□ -1.02
TRIM55-204ENST00000353317 MFSD3Q96ES6 412 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 CDRT15Q96T59 188 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 SLC39A8Q9C0K1 460 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 EPB41L1Q9H4G0 881 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 CERS4Q9HA82 394 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 NMRAL1Q9HBL8 299 aa8.66□□□□□ -1.02
TRIM55-204ENST00000353317 G3BP2Q9UN86 482 aaKnown RBP8.66□□□□□ -1.02
TRIM55-204ENST00000353317 TMEM114B3SHH9 223 aa8.65□□□□□ -1.02
TRIM55-204ENST00000353317 TK2O00142 265 aa8.65□□□□□ -1.02
TRIM55-204ENST00000353317 VILLO15195 856 aa8.65□□□□□ -1.02
TRIM55-204ENST00000353317 RFPL2O75678 378 aa8.65□□□□□ -1.02
TRIM55-204ENST00000353317 CRTAMO95727 393 aa8.65□□□□□ -1.02
TRIM55-204ENST00000353317 THRAP10827 490 aa8.65□□□□□ -1.02
TRIM55-204ENST00000353317 PPM1AP35813 382 aa8.65□□□□□ -1.02
TRIM55-204ENST00000353317 CCR2P41597 374 aa8.65□□□□□ -1.02
TRIM55-204ENST00000353317 MS4A2Q01362 244 aa8.65□□□□□ -1.02
TRIM55-204ENST00000353317 FLOT2Q14254 428 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms