RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 NCANO14594 1321 aa11.27□□□□□ -0.6
SLC6A20-201ENST00000353278 RECQL5O94762 991 aaPredicted RBP11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 KCNH1O95259 989 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 NR2F1P10589 423 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 CDH3P22223 829 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 POLD2P49005 469 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 LSM12Q3MHD2 195 aaKnown RBP11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 ARSHQ5FYA8 562 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 TNS4Q8IZW8 715 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 RNFT2Q96EX2 444 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 RMND5BQ96G75 393 aaPredicted RBP11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 COL20A1Q9P218 1284 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 FPGTO14772 594 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 ALADP13716 330 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 PSMC3P17980 439 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 FSHRP23945 695 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 TALDO1P37837 337 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 DGKEP52429 567 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 PURAQ00577 322 aaKnown RBP11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 IL5RAQ01344 420 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 SAMD4BQ5PRF9 694 aaKnown RBP11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 CDC73Q6P1J9 531 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 UBE2R2Q712K3 238 aaPredicted RBP11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 RNF44Q7L0R7 432 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 SLC26A9Q7LBE3 791 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 APTXQ7Z2E3 356 aaKnown RBP11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 PIWIL4Q7Z3Z4 852 aaKnown RBP11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 PCED1BQ96HM7 432 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 MRPL57Q9BQC6 102 aaKnown RBP11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 ANGPT4Q9Y264 503 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 KLRG2A4D1S0 409 aaPredicted RBP11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 HMGB3O15347 200 aaKnown RBP11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 RCN1Q15293 331 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 GPAT3Q53EU6 434 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 PRR23BQ6ZRT6 265 aa11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 EBNA1BP2Q99848 306 aaKnown RBP11.27□□□□□ -0.61
SLC6A20-201ENST00000353278 C22orf31O95567 290 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 CFIP05156 583 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 PCCBP05166 539 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 CPSF6Q16630 551 aaKnown RBP eCLIP11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 TEX44Q53QW1 395 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 OR52L1Q8NGH7 329 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 SLC4A5Q9BY07 1137 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 SLITRK2Q9H156 845 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 L1RE1Q9UN81 338 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 CORO2BQ9UQ03 480 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 BCLAF3A2AJT9 711 aaKnown RBP11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 SLC31A1O15431 190 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 FKBP6O75344 327 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 MMP8P22894 467 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 STX4Q12846 297 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 NEK10Q6ZWH5 1172 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 JOSD2Q8TAC2 188 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 ACMSDQ8TDX5 336 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 CNBD2Q96M20 576 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 LMAN2LQ9H0V9 348 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 C3orf14Q9HBI5 128 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 ABI3Q9P2A4 366 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 ADAM30Q9UKF2 790 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 COL6A1P12109 1028 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 WARSP23381 471 aaKnown RBP11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 PDGFRLQ15198 375 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 FNBP1LQ5T0N5 605 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 C16orf46Q6P387 395 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 PACS1Q6VY07 963 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 ZCCHC23Q6ZST2 131 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 TCAIMQ8N3R3 496 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 CDYL2Q8N8U2 506 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 ITFG1Q8TB96 612 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 SLC38A3Q99624 504 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 TMEM191CA6NGB0 347 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 MYL12AP19105 171 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 MCEMP1Q8IX19 187 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 OR4K2Q8NGD2 314 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 RNF145Q96MT1 663 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 CPXM1Q96SM3 734 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 TRMT61BQ9BVS5 477 aaKnown RBP11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 REEP1Q9H902 201 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 PCDH12Q9NPG4 1184 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 COQ6Q9Y2Z9 468 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 VWA7Q9Y334 891 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 AP4S1Q9Y587 144 aa11.26□□□□□ -0.61
SLC6A20-201ENST00000353278 ZNF536O15090 1300 aa11.25□□□□□ -0.61
SLC6A20-201ENST00000353278 TRBV23OR9-2A0A075B6M9 112 aa11.25□□□□□ -0.61
SLC6A20-201ENST00000353278 FCHO1O14526 889 aa11.25□□□□□ -0.61
SLC6A20-201ENST00000353278 PEX11AO75192 247 aa11.25□□□□□ -0.61
SLC6A20-201ENST00000353278 RPP40O75818 363 aaKnown RBP11.25□□□□□ -0.61
SLC6A20-201ENST00000353278 SNUPNO95149 360 aaKnown RBP11.25□□□□□ -0.61
SLC6A20-201ENST00000353278 ACADSP16219 412 aa11.25□□□□□ -0.61
SLC6A20-201ENST00000353278 IL17AQ16552 155 aa11.25□□□□□ -0.61
SLC6A20-201ENST00000353278 MAPKAPK3Q16644 382 aa11.25□□□□□ -0.61
SLC6A20-201ENST00000353278 TRIM71Q2Q1W2 868 aaKnown RBP11.25□□□□□ -0.61
SLC6A20-201ENST00000353278 TRMT5Q32P41 509 aaKnown RBP11.25□□□□□ -0.61
SLC6A20-201ENST00000353278 CSPG4P5Q96PW8 444 aa11.25□□□□□ -0.61
SLC6A20-201ENST00000353278 APOL4Q9BPW4 351 aa11.25□□□□□ -0.61
SLC6A20-201ENST00000353278 NRP1O14786 923 aa11.25□□□□□ -0.61
SLC6A20-201ENST00000353278 SCN2BO60939 215 aa11.25□□□□□ -0.61
SLC6A20-201ENST00000353278 HSMCR30P0CW71 290 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms