RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ARID3BQ8IVW6 561 aaPredicted RBP6.95□□□□□ -1.3
TRIM55-203ENST00000350034 MICALL1Q8N3F8 863 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 CARNMT1Q8N4J0 409 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 TTC30BQ8N4P2 665 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 SHKBP1Q8TBC3 707 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 WFDC5Q8TCV5 224 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 KCTD4Q8WVF5 259 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 STON2Q8WXE9 905 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 SLC7A6OSQ96CW6 309 aaPredicted RBP6.95□□□□□ -1.3
TRIM55-203ENST00000350034 DNAJC1Q96KC8 554 aaKnown RBP6.95□□□□□ -1.3
TRIM55-203ENST00000350034 TBATAQ96M53 351 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 TMEM237Q96Q45 408 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 OLFM1Q99784 485 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 GATA5Q9BWX5 397 aaPredicted RBP6.95□□□□□ -1.3
TRIM55-203ENST00000350034 SLC46A2Q9BY10 475 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 MUC3BQ9H195 1237 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 STN1Q9H668 368 aaKnown RBP6.95□□□□□ -1.3
TRIM55-203ENST00000350034 SLC40A1Q9NP59 571 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 SCUBE2Q9NQ36 999 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 FBXO6Q9NRD1 293 aaPredicted RBP6.95□□□□□ -1.3
TRIM55-203ENST00000350034 TXLNGQ9NUQ3 528 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 NLE1Q9NVX2 485 aaPredicted RBP6.95□□□□□ -1.3
TRIM55-203ENST00000350034 OXSMQ9NWU1 459 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 CFAP97Q9P2B7 532 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 MARCH4Q9P2E8 410 aaPredicted RBP6.95□□□□□ -1.3
TRIM55-203ENST00000350034 HEY2Q9UBP5 337 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 VPS51Q9UID3 782 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 HAO1Q9UJM8 370 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 LSM7Q9UK45 103 aaKnown RBP6.95□□□□□ -1.3
TRIM55-203ENST00000350034 CORO1CQ9ULV4 474 aaPredicted RBP6.95□□□□□ -1.3
TRIM55-203ENST00000350034 ARL5AQ9Y689 179 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 PTPRSQ13332 1948 aa6.95□□□□□ -1.3
TRIM55-203ENST00000350034 KIAA1671Q9BY89 1806 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 ANAPC1Q9H1A4 1944 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 A0A0G2JND7 137 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 A0A1W2PRU2 124 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 E2F8A0AVK6 867 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 TYW5A2RUC4 315 aaKnown RBP6.94□□□□□ -1.3
TRIM55-203ENST00000350034 LCHNA4D1U4 455 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 OR51F1A6NGY5 319 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 HIDE1A8MVS5 230 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 H0Y626 953 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 LEFTY2O00292 366 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 CCL22O00626 93 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 DLX3O60479 287 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 HNRNPCL1O60812 293 aaKnown RBP6.94□□□□□ -1.3
TRIM55-203ENST00000350034 LYPLA1O75608 230 aaPredicted RBP6.94□□□□□ -1.3
TRIM55-203ENST00000350034 CRTAMO95727 393 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 FGF19O95750 216 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 PDHA1P08559 390 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 POU2F2P09086 479 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 NQO1P15559 274 aaKnown RBP6.94□□□□□ -1.3
TRIM55-203ENST00000350034 TCF3P15923 654 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 FDXRP22570 491 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 DDX6P26196 483 aaKnown RBP eCLIP6.94□□□□□ -1.3
TRIM55-203ENST00000350034 CCR2P41597 374 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 PGGT1BP53609 377 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 DNAJB13P59910 316 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 AP1S1P61966 158 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 PRAMEP78395 509 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 TIAL1Q01085 375 aaKnown RBP eCLIP6.94□□□□□ -1.3
TRIM55-203ENST00000350034 CAMK1Q14012 370 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 SEMA3AQ14563 771 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 PTPRCAPQ14761 206 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 MPPE1Q53F39 396 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 TECRLQ5HYJ1 363 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 PPM1LQ5SGD2 360 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 HECTD2Q5U5R9 776 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 LRRC8EQ6NSJ5 796 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 ZNF549Q6P9A3 640 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 LINGO4Q6UY18 593 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 NAPRTQ6XQN6 538 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 RAPH1Q70E73 1250 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 MAVSQ7Z434 540 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 PTAR1Q7Z6K3 402 aaPredicted RBP6.94□□□□□ -1.3
TRIM55-203ENST00000350034 MTDHQ86UE4 582 aaKnown RBP6.94□□□□□ -1.3
TRIM55-203ENST00000350034 BBS7Q8IWZ6 715 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 APCDD1Q8J025 514 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 ELMOD1Q8N336 334 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 FSTL5Q8N475 847 aaPredicted RBP6.94□□□□□ -1.3
TRIM55-203ENST00000350034 MAB21L3Q8N8X9 362 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 GPATCH11Q8N954 259 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 TDRD5Q8NAT2 981 aaKnown RBP6.94□□□□□ -1.3
TRIM55-203ENST00000350034 MDGA1Q8NFP4 955 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 OR13C4Q8NGS5 318 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 PPP1R14CQ8TAE6 165 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 FIBINQ8TAL6 211 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 PIWIL2Q8TC59 973 aaKnown RBP6.94□□□□□ -1.3
TRIM55-203ENST00000350034 BLOC1S5Q8TDH9 187 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 SLC22A17Q8WUG5 538 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 POF1BQ8WVV4 589 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 INPP5DQ92835 1189 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 ACDQ96AP0 544 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 VOPP1Q96AW1 172 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 NXNL1Q96CM4 212 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 KLHL29Q96CT2 875 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 PTCD3Q96EY7 689 aaKnown RBP6.94□□□□□ -1.3
TRIM55-203ENST00000350034 TSPAN17Q96FV3 270 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 CDKN2AIPNLQ96HQ2 116 aa6.94□□□□□ -1.3
TRIM55-203ENST00000350034 ELMO2Q96JJ3 720 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms