RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 TAS1R2Q8TE23 839 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 KCTD4Q8WVF5 259 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 CEP170P1Q96L14 293 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 ZNF577Q9BSK1 485 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 COA1Q9GZY4 146 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 RIOX1Q9H6W3 641 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 ERVMER34-1Q9H9K5 563 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 POPDC2Q9HBU9 364 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 ZBTB26Q9HCK0 441 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 CST8O60676 142 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 SLITRK5O94991 958 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 NTRK1P04629 796 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 ARSAP15289 507 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 CYP2A7P20853 494 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 PRKCHP24723 683 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 SOX9P48436 509 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 SERPINB10P48595 397 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 ATP6AP1Q15904 470 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 RAP1GAP2Q684P5 730 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 KIAA1841Q6NSI8 718 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 FAM178BQ8IXR5 827 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 CHAC2Q8WUX2 184 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 ASB2Q96Q27 587 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 USB1Q9BQ65 265 aaKnown RBP10.7□□□□□ -0.7
CAPN3-203ENST00000349748 CBWD1Q9BRT8 395 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 FBXL12Q9NXK8 326 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 AGTPBP1Q9UPW5 1226 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 PCDHB12Q9Y5F1 795 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 TEX51A0A1B0GUA7 166 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 WDR64B1ANS9 1081 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 TRIM24O15164 1050 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 EIF3DO15371 548 aaKnown RBP eCLIP10.69□□□□□ -0.7
CAPN3-203ENST00000349748 TADA2AO75478 443 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 RASAL1O95294 804 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 OXTRP30559 389 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 GRIK1P39086 918 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 RPS9P46781 194 aaKnown RBP10.69□□□□□ -0.7
CAPN3-203ENST00000349748 NPTX2P47972 431 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 PPP4CP60510 307 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 RFTN1Q14699 578 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-203ENST00000349748 C5orf22Q49AR2 442 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 KCNT1Q5JUK3 1230 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 ZNF720Q7Z2F6 126 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 AMIGO1Q86WK6 493 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 CDR2LQ86X02 465 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-203ENST00000349748 SPPL2CQ8IUH8 684 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 PIK3C3Q8NEB9 887 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 PI4K2AQ9BTU6 479 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 C9orf16Q9BUW7 83 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 CCDC90BQ9GZT6 254 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 SERHL2Q9H4I8 314 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 RANGRFQ9HD47 186 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-203ENST00000349748 GABBR1Q9UBS5 961 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 COPG1Q9Y678 874 aaKnown RBP10.69□□□□□ -0.7
CAPN3-203ENST00000349748 USP17L15C9J2P7 530 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 USP17L13C9JLJ4 530 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 USP17L11C9JVI0 530 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 USP17L18D6R9N7 530 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 USP17L22D6RA61 530 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 USP17L17D6RBQ6 530 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 USP17L19D6RCP7 530 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 USP17L20D6RJB6 530 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 GAS2O43903 313 aaKnown RBP10.69□□□□□ -0.7
CAPN3-203ENST00000349748 ZNF780AO75290 641 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-203ENST00000349748 GOT2P00505 430 aaKnown RBP10.69□□□□□ -0.7
CAPN3-203ENST00000349748 ZNF250P15622 560 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 FSHRP23945 695 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 CRHBPP24387 322 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 CCNCP24863 283 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 IL1R2P27930 398 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 SNRPD2P62316 118 aaKnown RBP10.69□□□□□ -0.7
CAPN3-203ENST00000349748 SPIRE1Q08AE8 756 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 USP17L24Q0WX57 530 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 GALNT3Q14435 633 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 ZNF267Q14586 743 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-203ENST00000349748 PLEKHM3Q6ZWE6 761 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 USP51Q70EK9 711 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 MON1BQ7L1V2 547 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 METTL3Q86U44 580 aaKnown RBP10.69□□□□□ -0.7
CAPN3-203ENST00000349748 NOXA1Q86UR1 476 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 IFNL1Q8IU54 200 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 UBQLNLQ8IYU4 475 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 SLAIN1Q8ND83 568 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 SHCBP1Q8NEM2 672 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 OR4M1Q8NGD0 313 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 SPATA18Q8TC71 538 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 DYNC2LI1Q8TCX1 351 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 TRPM4Q8TD43 1214 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 DEPDC1BQ8WUY9 529 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 FAF2Q96CS3 445 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 FIZ1Q96SL8 496 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 SYT17Q9BSW7 474 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 UCK2Q9BZX2 261 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 ROGDIQ9GZN7 287 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 DPEP3Q9H4B8 488 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 LIN7BQ9HAP6 207 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 PNPLA8Q9NP80 782 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 AGPAT4Q9NRZ5 378 aa10.69□□□□□ -0.7
CAPN3-203ENST00000349748 RBAKQ9NYW8 714 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-203ENST00000349748 IPPQ9Y573 584 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms