RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 VASPP50552 380 aaPredicted RBP18.74■□□□□ 0.59
PTN-201ENST00000348225 NEK3P51956 506 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 ZNF140P52738 457 aaPredicted RBP18.74■□□□□ 0.59
PTN-201ENST00000348225 FSTL4Q6MZW2 842 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 VITQ6UXI7 678 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 MFSD6LQ8IWD5 586 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 ETFBKMTQ8IXQ9 262 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 PLPP6Q8IY26 295 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 NDUFAF2Q8N183 169 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 CPA6Q8N4T0 437 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 DCLK2Q8N568 766 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 SPOCK2Q92563 424 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 ISL2Q96A47 359 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 ATXN7L3BQ96GX2 97 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 CABS1Q96KC9 395 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 PAIP2Q9BPZ3 127 aaKnown RBP18.74■□□□□ 0.59
PTN-201ENST00000348225 S1PR5Q9H228 398 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 PRO3102Q9H379 93 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 ECT2Q9H8V3 914 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 NLE1Q9NVX2 485 aaPredicted RBP18.74■□□□□ 0.59
PTN-201ENST00000348225 FBXO5Q9UKT4 447 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 KCTD3Q9Y597 815 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 TRAFD1O14545 582 aaPredicted RBP18.74■□□□□ 0.59
PTN-201ENST00000348225 TRIM24O15164 1050 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 TBX10O75333 385 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 TULP3O75386 442 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 POP4O95707 220 aaKnown RBP18.74■□□□□ 0.59
PTN-201ENST00000348225 ALDOAP04075 364 aaKnown RBP18.74■□□□□ 0.59
PTN-201ENST00000348225 LPOP22079 712 aaPredicted RBP18.74■□□□□ 0.59
PTN-201ENST00000348225 TYK2P29597 1187 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 CD151P48509 253 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 POLD2P49005 469 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 WDR4P57081 412 aaKnown RBP18.74■□□□□ 0.59
PTN-201ENST00000348225 FCHO2Q0JRZ9 810 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 CTBP1Q13363 440 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 TMEM215Q68D42 235 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 GRAMD4Q6IC98 578 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 LVRNQ6Q4G3 990 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 GALNT7Q86SF2 657 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 ZC3HC1Q86WB0 502 aaKnown RBP18.74■□□□□ 0.59
PTN-201ENST00000348225 DENND6AQ8IWF6 608 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 GDAP1Q8TB36 358 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 CKAP2Q8WWK9 683 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 MYADMQ96S97 322 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 GPR22Q99680 433 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 CPEB1Q9BZB8 566 aaKnown RBP18.74■□□□□ 0.59
PTN-201ENST00000348225 CIPCQ9C0C6 399 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 MAGEE1Q9HCI5 957 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 CLDND1Q9NY35 253 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 DEC1Q9P2X7 70 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 SLCO3A1Q9UIG8 710 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 A0A1W2PQ67 120 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 AHSGP02765 367 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 MPOP05164 745 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 DLDP09622 509 aaKnown RBP18.73■□□□□ 0.59
PTN-201ENST00000348225 PSMA3P25788 255 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 SLC8A1P32418 973 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 CRHR1P34998 444 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 ABL2P42684 1182 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 ARSDP51689 593 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 CCNHP51946 323 aaPredicted RBP18.73■□□□□ 0.59
PTN-201ENST00000348225 TMPRSS15P98073 1019 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 MPP1Q00013 466 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 CTC1Q2NKJ3 1217 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 MRNIPQ6NTE8 343 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 EP400NLQ6ZTU2 488 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 PTAR1Q7Z6K3 402 aaPredicted RBP18.73■□□□□ 0.59
PTN-201ENST00000348225 MDGA1Q8NFP4 955 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 OR13C4Q8NGS5 318 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 PIH1D2Q8WWB5 315 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 ELSPBP1Q96BH3 223 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 TBATAQ96M53 351 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 MAGEB18Q96M61 343 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 SLC13A1Q9BZW2 595 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 SNX15Q9NRS6 342 aa18.73■□□□□ 0.59
PTN-201ENST00000348225 MTO1Q9Y2Z2 717 aaKnown RBP18.73■□□□□ 0.59
PTN-201ENST00000348225 TMEM265A0A087WTH1 108 aa18.72■□□□□ 0.59
PTN-201ENST00000348225 BUD23O43709 281 aaKnown RBP18.72■□□□□ 0.59
PTN-201ENST00000348225 BNIP3LO60238 219 aa18.72■□□□□ 0.59
PTN-201ENST00000348225 GLRA3O75311 464 aa18.72■□□□□ 0.59
PTN-201ENST00000348225 GKP32189 559 aa18.72■□□□□ 0.59
PTN-201ENST00000348225 MAGEA12P43365 314 aa18.72■□□□□ 0.59
PTN-201ENST00000348225 ST8SIA6P61647 398 aa18.72■□□□□ 0.59
PTN-201ENST00000348225 AFTPHQ6ULP2 937 aa18.72■□□□□ 0.59
PTN-201ENST00000348225 C12orf40Q86WS4 652 aa18.72■□□□□ 0.59
PTN-201ENST00000348225 CILP2Q8IUL8 1156 aa18.72■□□□□ 0.59
PTN-201ENST00000348225 OR4K2Q8NGD2 314 aa18.72■□□□□ 0.59
PTN-201ENST00000348225 BCAS4Q8TDM0 211 aa18.72■□□□□ 0.59
PTN-201ENST00000348225 CYB5D2Q8WUJ1 264 aa18.72■□□□□ 0.59
PTN-201ENST00000348225 CHMP6Q96FZ7 201 aa18.72■□□□□ 0.59
PTN-201ENST00000348225 MRGPRX3Q96LB0 322 aa18.72■□□□□ 0.59
PTN-201ENST00000348225 ZNF641Q96N77 438 aaPredicted RBP18.72■□□□□ 0.59
PTN-201ENST00000348225 HPS4Q9NQG7 708 aa18.72■□□□□ 0.59
PTN-201ENST00000348225 ZNF711Q9Y462 761 aa18.72■□□□□ 0.59
PTN-201ENST00000348225 DOCK8Q8NF50 2099 aa18.72■□□□□ 0.59
PTN-201ENST00000348225 DENND4AQ7Z401 1863 aa18.72■□□□□ 0.59
PTN-201ENST00000348225 A0A0J9YYE9 177 aa18.71■□□□□ 0.59
PTN-201ENST00000348225 CCDC162PA2VCL2 907 aa18.71■□□□□ 0.59
PTN-201ENST00000348225 WASH3PC4AMC7 463 aa18.71■□□□□ 0.59
PTN-201ENST00000348225 AURKAO14965 403 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms