RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 TMEM248Q9NWD8 314 aa21.43■■□□□ 1.02
PTPN18-202ENST00000347849 G3V2L1 256 aa21.43■■□□□ 1.02
PTPN18-202ENST00000347849 GJB5O95377 273 aa21.43■■□□□ 1.02
PTPN18-202ENST00000347849 XRCC1P18887 633 aaPredicted RBP21.43■■□□□ 1.02
PTPN18-202ENST00000347849 GLDCP23378 1020 aa21.43■■□□□ 1.02
PTPN18-202ENST00000347849 THOP1P52888 689 aa21.43■■□□□ 1.02
PTPN18-202ENST00000347849 PKNOX1P55347 436 aa21.43■■□□□ 1.02
PTPN18-202ENST00000347849 IRF9Q00978 393 aa21.43■■□□□ 1.02
PTPN18-202ENST00000347849 GRTP1Q5TC63 336 aa21.43■■□□□ 1.02
PTPN18-202ENST00000347849 SLC8B1Q6J4K2 584 aa21.43■■□□□ 1.02
PTPN18-202ENST00000347849 B3GNT6Q6ZMB0 384 aa21.43■■□□□ 1.02
PTPN18-202ENST00000347849 KCNMB4Q86W47 210 aa21.43■■□□□ 1.02
PTPN18-202ENST00000347849 ATP6V0D2Q8N8Y2 350 aa21.43■■□□□ 1.02
PTPN18-202ENST00000347849 ZNF784Q8NCA9 323 aaPredicted RBP21.43■■□□□ 1.02
PTPN18-202ENST00000347849 PABPC5Q96DU9 382 aaKnown RBP21.43■■□□□ 1.02
PTPN18-202ENST00000347849 RPRD1AQ96P16 312 aaPredicted RBP21.43■■□□□ 1.02
PTPN18-202ENST00000347849 CLSTN3Q9BQT9 956 aa21.43■■□□□ 1.02
PTPN18-202ENST00000347849 PTTG2Q9NZH5 202 aa21.43■■□□□ 1.02
PTPN18-202ENST00000347849 MTRRQ9UBK8 725 aa21.43■■□□□ 1.02
PTPN18-202ENST00000347849 SLC2A6Q9UGQ3 507 aa21.43■■□□□ 1.02
PTPN18-202ENST00000347849 TMCO1Q9UM00 188 aa21.43■■□□□ 1.02
PTPN18-202ENST00000347849 AAR2Q9Y312 384 aaKnown RBP21.43■■□□□ 1.02
PTPN18-202ENST00000347849 RGSL1A5PLK6 1076 aa21.42■■□□□ 1.02
PTPN18-202ENST00000347849 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.42■■□□□ 1.02
PTPN18-202ENST00000347849 HNRNPRO43390 633 aaKnown RBP21.42■■□□□ 1.02
PTPN18-202ENST00000347849 PENKP01210 267 aaPredicted RBP21.42■■□□□ 1.02
PTPN18-202ENST00000347849 NAB1Q13506 487 aa21.42■■□□□ 1.02
PTPN18-202ENST00000347849 FSTL4Q6MZW2 842 aa21.42■■□□□ 1.02
PTPN18-202ENST00000347849 PAOXQ6QHF9 649 aa21.42■■□□□ 1.02
PTPN18-202ENST00000347849 GALNT4Q8N4A0 578 aa21.42■■□□□ 1.02
PTPN18-202ENST00000347849 ZFP28Q8NHY6 868 aa21.42■■□□□ 1.02
PTPN18-202ENST00000347849 USP13Q92995 863 aaPredicted RBP21.42■■□□□ 1.02
PTPN18-202ENST00000347849 IGSF21Q96ID5 467 aa21.42■■□□□ 1.02
PTPN18-202ENST00000347849 CPNE1Q99829 537 aa21.42■■□□□ 1.02
PTPN18-202ENST00000347849 NT5MQ9NPB1 228 aa21.42■■□□□ 1.02
PTPN18-202ENST00000347849 EPHA3P29320 983 aa21.41■■□□□ 1.02
PTPN18-202ENST00000347849 ACVRL1P37023 503 aa21.41■■□□□ 1.02
PTPN18-202ENST00000347849 PRPF18Q99633 342 aaKnown RBP21.41■■□□□ 1.02
PTPN18-202ENST00000347849 RBBP8Q99708 897 aa21.41■■□□□ 1.02
PTPN18-202ENST00000347849 HSFX1Q9UBD0 423 aa21.41■■□□□ 1.02
PTPN18-202ENST00000347849 RAB26Q9ULW5 256 aa21.41■■□□□ 1.02
PTPN18-202ENST00000347849 A0A096LPK6 155 aa21.41■■□□□ 1.02
PTPN18-202ENST00000347849 TRIM13O60858 407 aa21.41■■□□□ 1.02
PTPN18-202ENST00000347849 CHRNGP07510 517 aa21.41■■□□□ 1.02
PTPN18-202ENST00000347849 MYBPC1Q00872 1141 aa21.41■■□□□ 1.02
PTPN18-202ENST00000347849 MS4A2Q01362 244 aa21.41■■□□□ 1.02
PTPN18-202ENST00000347849 USP41Q3LFD5 358 aa21.41■■□□□ 1.02
PTPN18-202ENST00000347849 C6orf52Q5T4I8 152 aa21.41■■□□□ 1.02
PTPN18-202ENST00000347849 TIGD7Q6NT04 549 aaPredicted RBP21.41■■□□□ 1.02
PTPN18-202ENST00000347849 C16orf89Q6UX73 402 aa21.41■■□□□ 1.02
PTPN18-202ENST00000347849 ZNF354CQ86Y25 554 aa21.41■■□□□ 1.02
PTPN18-202ENST00000347849 SPNS2Q8IVW8 549 aa21.41■■□□□ 1.02
PTPN18-202ENST00000347849 RNF168Q8IYW5 571 aaPredicted RBP21.41■■□□□ 1.02
PTPN18-202ENST00000347849 KIFC1Q9BW19 673 aa21.41■■□□□ 1.02
PTPN18-202ENST00000347849 PRPF19Q9UMS4 504 aaKnown RBP21.41■■□□□ 1.02
PTPN18-202ENST00000347849 ATP11BQ9Y2G3 1177 aa21.41■■□□□ 1.02
PTPN18-202ENST00000347849 ACTL7AQ9Y615 435 aa21.41■■□□□ 1.02
PTPN18-202ENST00000347849 COL4A6Q14031 1691 aa21.41■■□□□ 1.02
PTPN18-202ENST00000347849 ANXA9O76027 345 aa21.4■■□□□ 1.02
PTPN18-202ENST00000347849 SLC6A4P31645 630 aa21.4■■□□□ 1.02
PTPN18-202ENST00000347849 ADGRE1Q14246 886 aa21.4■■□□□ 1.02
PTPN18-202ENST00000347849 ZNF423Q2M1K9 1284 aa21.4■■□□□ 1.02
PTPN18-202ENST00000347849 MYLK3Q32MK0 819 aa21.4■■□□□ 1.02
PTPN18-202ENST00000347849 ESRP1Q6NXG1 681 aaKnown RBP21.4■■□□□ 1.02
PTPN18-202ENST00000347849 BNC2Q6ZN30 1099 aaPredicted RBP21.4■■□□□ 1.02
PTPN18-202ENST00000347849 LCA5Q86VQ0 697 aa21.4■■□□□ 1.02
PTPN18-202ENST00000347849 GATA5Q9BWX5 397 aaPredicted RBP21.4■■□□□ 1.02
PTPN18-202ENST00000347849 ILKAPQ9H0C8 392 aaPredicted RBP21.4■■□□□ 1.02
PTPN18-202ENST00000347849 OLA1Q9NTK5 396 aaKnown RBP21.4■■□□□ 1.02
PTPN18-202ENST00000347849 GALNT8Q9NY28 637 aa21.4■■□□□ 1.02
PTPN18-202ENST00000347849 DOCK4Q8N1I0 1966 aa21.4■■□□□ 1.02
PTPN18-202ENST00000347849 TANC1Q9C0D5 1861 aa21.4■■□□□ 1.02
PTPN18-202ENST00000347849 MPSTP25325 297 aa21.4■■□□□ 1.02
PTPN18-202ENST00000347849 ITGB8P26012 769 aa21.4■■□□□ 1.02
PTPN18-202ENST00000347849 SPRP35270 261 aaPredicted RBP21.4■■□□□ 1.02
PTPN18-202ENST00000347849 CCR10P46092 362 aa21.4■■□□□ 1.02
PTPN18-202ENST00000347849 NDST2P52849 883 aa21.4■■□□□ 1.02
PTPN18-202ENST00000347849 LSM12Q3MHD2 195 aaKnown RBP21.4■■□□□ 1.02
PTPN18-202ENST00000347849 RANBP10Q6VN20 620 aa21.4■■□□□ 1.02
PTPN18-202ENST00000347849 LINC00523Q86TU6 105 aa21.4■■□□□ 1.02
PTPN18-202ENST00000347849 LILRA2Q8N149 483 aa21.4■■□□□ 1.02
PTPN18-202ENST00000347849 PGBD5Q8N414 524 aa21.4■■□□□ 1.02
PTPN18-202ENST00000347849 PNPLA1Q8N8W4 532 aa21.4■■□□□ 1.02
PTPN18-202ENST00000347849 OR52K2Q8NGK3 314 aa21.4■■□□□ 1.02
PTPN18-202ENST00000347849 DRGXA6NNA5 263 aa21.39■■□□□ 1.02
PTPN18-202ENST00000347849 ENO3P13929 434 aaPredicted RBP21.39■■□□□ 1.02
PTPN18-202ENST00000347849 ARNTP27540 789 aa21.39■■□□□ 1.02
PTPN18-202ENST00000347849 ETFBP38117 255 aa21.39■■□□□ 1.02
PTPN18-202ENST00000347849 SERPINB8P50452 374 aa21.39■■□□□ 1.02
PTPN18-202ENST00000347849 DSC2Q02487 901 aa21.39■■□□□ 1.02
PTPN18-202ENST00000347849 CYLC2Q14093 348 aaPredicted RBP21.39■■□□□ 1.02
PTPN18-202ENST00000347849 BHLHE22Q8NFJ8 381 aaPredicted RBP21.39■■□□□ 1.02
PTPN18-202ENST00000347849 AUTS2Q8WXX7 1259 aa21.39■■□□□ 1.02
PTPN18-202ENST00000347849 RCN3Q96D15 328 aa21.39■■□□□ 1.02
PTPN18-202ENST00000347849 ZNF512Q96ME7 567 aaPredicted RBP21.39■■□□□ 1.02
PTPN18-202ENST00000347849 MCMBPQ9BTE3 642 aa21.39■■□□□ 1.02
PTPN18-202ENST00000347849 TTLL2Q9BWV7 592 aa21.39■■□□□ 1.02
PTPN18-202ENST00000347849 NMRAL1Q9HBL8 299 aa21.39■■□□□ 1.02
PTPN18-202ENST00000347849 TBX21Q9UL17 535 aa21.39■■□□□ 1.02
PTPN18-202ENST00000347849 MAGEB16A2A368 324 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms