RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 STK39Q9UEW8 545 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 PRG3Q9Y2Y8 225 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-201ENST00000347613 LAMA1P25391 3075 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 MAGEA13PA6NCF6 341 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 MROH6A6NGR9 719 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 NCAM2O15394 837 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 ADAM12O43184 909 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 PRAMEF12O95522 483 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 CRTAMO95727 393 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 SLC6A4P31645 630 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 PPARGP37231 505 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-201ENST00000347613 AIF1P55008 147 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 POLE2P56282 527 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 EFEMP1Q12805 493 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 CYLC2Q14093 348 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-201ENST00000347613 PTK2BQ14289 1009 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 GRM2Q14416 872 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 TBCCQ15814 346 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 NRF1Q16656 503 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 UNC50Q53HI1 259 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 CFAP157Q5JU67 520 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 HECTD2Q5U5R9 776 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 NAPEPLDQ6IQ20 393 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 CHSY3Q70JA7 882 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 ADGRG6Q86SQ4 1221 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 CILP2Q8IUL8 1156 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 GTF3C2Q8WUA4 911 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-201ENST00000347613 BCL7CQ8WUZ0 217 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-201ENST00000347613 EXT2Q93063 718 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 HAPLN3Q96S86 360 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 NMRK2Q9NPI5 230 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 MAP10Q9P2G4 905 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 TLK1Q9UKI8 766 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 ANGPTL2Q9UKU9 493 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 GIT1Q9Y2X7 761 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 RNF11Q9Y3C5 154 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 SPO11Q9Y5K1 396 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 PRSS51A0A1B0GVH4 220 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 MAGEB16A2A368 324 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 VILLO15195 856 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 FKBP6O75344 327 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 SLC4A1P02730 911 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 ZNF26P17031 533 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-201ENST00000347613 PCSK6P29122 969 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 ZFP36L2P47974 494 aaKnown RBP6.07□□□□□ -1.44
CLCN3-201ENST00000347613 PFKPQ01813 784 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 ITKQ08881 620 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 PDK3Q15120 406 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 C18orf21Q32NC0 220 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-201ENST00000347613 UGT3A1Q6NUS8 523 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 AAGABQ6PD74 315 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 IFNL1Q8IU54 200 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 CPNE9Q8IYJ1 553 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 KYQ8NBH2 561 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 LRTOMTQ8WZ04 291 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 TADA1Q96BN2 335 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 DNAJC1Q96KC8 554 aaKnown RBP6.07□□□□□ -1.44
CLCN3-201ENST00000347613 SIKE1Q9BRV8 207 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 TRPC7Q9HCX4 862 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 SLC52A3Q9NQ40 469 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 GTSE1Q9NYZ3 720 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 UXTQ9UBK9 157 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-201ENST00000347613 APPL1Q9UKG1 709 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 DSEQ9UL01 958 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 SCN5AQ14524 2016 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 CFAP54Q96N23 3096 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 ASPDHA6ND91 283 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 ERI2A8K979 691 aaKnown RBP6.06□□□□□ -1.44
CLCN3-201ENST00000347613 TMX2-CTNND1H3BSU7 103 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 UBXN8O00124 270 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 DLGAP1O14490 977 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 ENPP3O14638 875 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 TRIM24O15164 1050 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 DUSP11O75319 330 aaKnown RBP6.06□□□□□ -1.44
CLCN3-201ENST00000347613 F9P00740 461 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 ODC1P11926 461 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 CCR1P32246 355 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 LEPRP48357 1165 aaKnown RBP6.06□□□□□ -1.44
CLCN3-201ENST00000347613 AGTR2P50052 363 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 ZNF157P51786 506 aaPredicted RBP6.06□□□□□ -1.44
CLCN3-201ENST00000347613 GRAMD1BQ3KR37 738 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 ITPRIPL1Q6GPH6 555 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 SCIMPQ6UWF3 145 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 LARP4Q71RC2 724 aaKnown RBP eCLIP6.06□□□□□ -1.44
CLCN3-201ENST00000347613 C11orf96Q7Z7L8 435 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 AMIGO2Q86SJ2 522 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 CUZD1Q86UP6 607 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 PHYKPLQ8IUZ5 450 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 PQLC1Q8N2U9 271 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 TMIGD2Q96BF3 282 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 SUSD3Q96L08 255 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 PHF12Q96QT6 1004 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 FAM96AQ9H5X1 160 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 TLR9Q9NR96 1032 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 PAPOLBQ9NRJ5 636 aaKnown RBP6.06□□□□□ -1.44
CLCN3-201ENST00000347613 ABCC13Q9NSE7 274 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 CLIC5Q9NZA1 410 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 NCKIPSDQ9NZQ3 722 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 DNAJC15Q9Y5T4 150 aa6.06□□□□□ -1.44
CLCN3-201ENST00000347613 DOCK6Q96HP0 2047 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms