RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 CES3Q6UWW8 571 aa19.08■□□□□ 0.65
CHMP4A-201ENST00000347519 TMC3Q7Z5M5 1100 aa19.08■□□□□ 0.65
CHMP4A-201ENST00000347519 ZBED8Q8IZ13 594 aa19.08■□□□□ 0.65
CHMP4A-201ENST00000347519 FBXO36Q8NEA4 188 aa19.08■□□□□ 0.65
CHMP4A-201ENST00000347519 CHRDQ9H2X0 955 aa19.08■□□□□ 0.65
CHMP4A-201ENST00000347519 BFARQ9NZS9 450 aa19.08■□□□□ 0.65
CHMP4A-201ENST00000347519 SERGEFQ9UGK8 458 aa19.08■□□□□ 0.65
CHMP4A-201ENST00000347519 SCN8AQ9UQD0 1980 aa19.08■□□□□ 0.64
CHMP4A-201ENST00000347519 TCRBV21S2A2A0A5A6 115 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 NPIPB15A6NHN6 443 aaPredicted RBP19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 UPK3BL1B0FP48 263 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 UPK3BL2E5RIL1 263 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 EIF3HO15372 352 aaKnown RBP eCLIP19.07■□□□□ 0.642e-6■□□□□ 9.8
CHMP4A-201ENST00000347519 BUD23O43709 281 aaKnown RBP19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 H2AFXP16104 143 aaPredicted RBP19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 GABRG2P18507 467 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 NDUFV2P19404 249 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 TNNT3P45378 269 aaPredicted RBP19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 PTPRCAPQ14761 206 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 BRD3Q15059 726 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 UGP2Q16851 508 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 LRRK1Q38SD2 2015 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 SYT13Q7L8C5 426 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 TSPAN33Q86UF1 283 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 TTC30BQ8N4P2 665 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 HCAR2Q8TDS4 363 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.07■□□□□ 0.642e-6■■■■■ 29
CHMP4A-201ENST00000347519 MRGPRX1Q96LB2 322 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 ZNF778Q96MU6 729 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 MCCC1Q96RQ3 725 aaPredicted RBP19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 EBNA1BP2Q99848 306 aaKnown RBP19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 PHACTR1Q9C0D0 580 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 PCDH12Q9NPG4 1184 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 CD93Q9NPY3 652 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 CHRAC1Q9NRG0 131 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 NINJ2Q9NZG7 142 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 GGT7Q9UJ14 662 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 ITM2BQ9Y287 266 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 SIT1Q9Y3P8 196 aa19.07■□□□□ 0.64
CHMP4A-201ENST00000347519 A0A1W2PP55 124 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 A0A1W2PQ67 120 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 CAPN8A6NHC0 703 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 LDB2O43679 373 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 RNASEH1O60930 286 aaKnown RBP19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 ADH1BP00325 375 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 C7P10643 843 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 LHCGRP22888 699 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 P2RY2P41231 377 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 SEPT6Q14141 434 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 PIP5KL1Q5T9C9 394 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 FAM46CQ5VWP2 391 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 ERN2Q76MJ5 926 aaKnown RBP19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 TTC7BQ86TV6 843 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 CAVIN3Q969G5 261 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 EID2BQ96D98 161 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 STAMBPL1Q96FJ0 436 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 SCRN2Q96FV2 425 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 FCRL3Q96P31 734 aaPredicted RBP19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 IL22Q9GZX6 179 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 EPB41L4BQ9H329 900 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 PABPC3Q9H361 631 aaKnown RBP19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 CDC42EP4Q9H3Q1 356 aaKnown RBP19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 SEMA4AQ9H3S1 761 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 FBRSQ9HAH7 460 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 DLGAP2Q9P1A6 1054 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 B4GALT6Q9UBX8 382 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 ZNF711Q9Y462 761 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 TCAF1Q9Y4C2 921 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 ARL5AQ9Y689 179 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 MAD1L1Q9Y6D9 718 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 CCDC151A5D8V7 595 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 AP3B1O00203 1094 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 C5AR1P21730 350 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 ADRA1DP25100 572 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 NMBRP28336 390 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 GPX6P59796 221 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 RALGDSQ12967 914 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 MTAPQ13126 283 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 KYNUQ16719 465 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 PCID2Q5JVF3 399 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 CASC4Q6P4E1 433 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 EMBQ6PCB8 327 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 FBXO38Q6PIJ6 1188 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 CRTC1Q6UUV9 634 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 LYSMD3Q7Z3D4 306 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 RELL1Q8IUW5 271 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 HDDC3Q8N4P3 179 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 CFAP36Q96G28 342 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 HHIPQ96QV1 700 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 RANBP9Q96S59 729 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 LYSMD1Q96S90 227 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 KIFC1Q9BW19 673 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 HDAC8Q9BY41 377 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 MFSD1Q9H3U5 465 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 MAGEE1Q9HCI5 957 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 SLC2A6Q9UGQ3 507 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 SOX13Q9UN79 622 aa19.06■□□□□ 0.64
CHMP4A-201ENST00000347519 MROH6A6NGR9 719 aa19.05■□□□□ 0.64
CHMP4A-201ENST00000347519 ATG13O75143 517 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms