RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 HLA-DQB2P05538 268 aa19.92■□□□□ 0.78
CLTA-202ENST00000345519 KCNA4P22459 653 aa19.92■□□□□ 0.78
CLTA-202ENST00000345519 NR2C2P49116 596 aa19.92■□□□□ 0.78
CLTA-202ENST00000345519 PEX5P50542 639 aa19.92■□□□□ 0.78
CLTA-202ENST00000345519 IRF4Q15306 451 aa19.92■□□□□ 0.78
CLTA-202ENST00000345519 PPP2R5EQ16537 467 aa19.92■□□□□ 0.78
CLTA-202ENST00000345519 SPOCD1Q6ZMY3 1216 aa19.92■□□□□ 0.78
CLTA-202ENST00000345519 MACC1Q6ZN28 852 aa19.92■□□□□ 0.78
CLTA-202ENST00000345519 SLC25A45Q8N413 288 aa19.92■□□□□ 0.78
CLTA-202ENST00000345519 EXD1Q8NHP7 514 aa19.92■□□□□ 0.78
CLTA-202ENST00000345519 PIH1D2Q8WWB5 315 aa19.92■□□□□ 0.78
CLTA-202ENST00000345519 SCRN2Q96FV2 425 aa19.92■□□□□ 0.78
CLTA-202ENST00000345519 ZNF830Q96NB3 372 aaPredicted RBP19.92■□□□□ 0.78
CLTA-202ENST00000345519 LGMNQ99538 433 aa19.92■□□□□ 0.78
CLTA-202ENST00000345519 SEMA3CQ99985 751 aa19.92■□□□□ 0.78
CLTA-202ENST00000345519 TMEM121BQ9BXQ6 578 aaPredicted RBP19.92■□□□□ 0.78
CLTA-202ENST00000345519 TDRD1Q9BXT4 1180 aaKnown RBP19.92■□□□□ 0.78
CLTA-202ENST00000345519 HAUS2Q9NVX0 235 aa19.92■□□□□ 0.78
CLTA-202ENST00000345519 DUSP10Q9Y6W6 482 aa19.92■□□□□ 0.78
CLTA-202ENST00000345519 EPG5Q9HCE0 2579 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 hCG_1818297A0A087WSY0 165 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 PSMD11O00231 422 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 CPP00450 1065 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 ITGAVP06756 1048 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 ELFN1P0C7U0 828 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 TGM2P21980 687 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 LHCGRP22888 699 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 DGKAP23743 735 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 MARCKSL1P49006 195 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 ZBTB17Q13105 803 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 TFDP2Q14188 446 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 LRRC14Q15048 493 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 PDK1Q15118 436 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 SLC14A2Q15849 920 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 TFDP3Q5H9I0 405 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 ZFYVE27Q5T4F4 411 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 SLCO6A1Q86UG4 719 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 CNTD1Q8N815 330 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 ACRBPQ8NEB7 543 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.91■□□□□ 0.78
CLTA-202ENST00000345519 RNF25Q96BH1 459 aaPredicted RBP19.91■□□□□ 0.78
CLTA-202ENST00000345519 TADA1Q96BN2 335 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 COQ10AQ96MF6 247 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 RBM22Q9NW64 420 aaKnown RBP eCLIP19.91■□□□□ 0.78
CLTA-202ENST00000345519 B4GALT6Q9UBX8 382 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 KLF15Q9UIH9 416 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 EFR3BQ9Y2G0 817 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 COQ6Q9Y2Z9 468 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 NEUROG3Q9Y4Z2 214 aa19.91■□□□□ 0.78
CLTA-202ENST00000345519 ARHGEF17Q96PE2 2063 aaPredicted RBP19.91■□□□□ 0.78
CLTA-202ENST00000345519 PPP1R12AO14974 1030 aaPredicted RBP19.9■□□□□ 0.78
CLTA-202ENST00000345519 PRLP01236 227 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 PRKCGP05129 697 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 MMP2P08253 660 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 PTPN7P35236 360 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 TRIM23P36406 574 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 COPS2P61201 443 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 HNRNPKP61978 463 aaKnown RBP eCLIP19.9■□□□□ 0.78
CLTA-202ENST00000345519 ADCY2Q08462 1091 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 EIF2B5Q13144 721 aaKnown RBP19.9■□□□□ 0.78
CLTA-202ENST00000345519 MTM1Q13496 603 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 PDE1CQ14123 709 aaPredicted RBP19.9■□□□□ 0.78
CLTA-202ENST00000345519 PTK2BQ14289 1009 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 PRKD1Q15139 912 aaPredicted RBP19.9■□□□□ 0.78
CLTA-202ENST00000345519 PROX2Q3B8N5 592 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 ARMC12Q5T9G4 340 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 KDM7AQ6ZMT4 941 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 DAAM2Q86T65 1068 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 RAVER1Q8IY67 606 aaKnown RBP19.9■□□□□ 0.78
CLTA-202ENST00000345519 OR4C6Q8NH72 309 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 KRT35Q92764 455 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 LYSMD1Q96S90 227 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 KCTD5Q9NXV2 234 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 FTSJ1Q9UET6 329 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 PNMA8BQ9ULN7 279 aaPredicted RBP19.9■□□□□ 0.78
CLTA-202ENST00000345519 APOBEC2Q9Y235 224 aaKnown RBP19.9■□□□□ 0.78
CLTA-202ENST00000345519 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.9■□□□□ 0.78
CLTA-202ENST00000345519 PCDHGA1Q9Y5H4 931 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 PCDHA3Q9Y5H8 950 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 HEY1Q9Y5J3 304 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 RAI2Q9Y5P3 530 aa19.9■□□□□ 0.78
CLTA-202ENST00000345519 NPIPB15A6NHN6 443 aaPredicted RBP19.89■□□□□ 0.77
CLTA-202ENST00000345519 KCNK1O00180 336 aa19.89■□□□□ 0.77
CLTA-202ENST00000345519 HEXIM1O94992 359 aaKnown RBP19.89■□□□□ 0.77
CLTA-202ENST00000345519 PDHA1P08559 390 aa19.89■□□□□ 0.77
CLTA-202ENST00000345519 HOXC4P09017 264 aaPredicted RBP19.89■□□□□ 0.77
CLTA-202ENST00000345519 ATXN1LP0C7T5 689 aaKnown RBP19.89■□□□□ 0.77
CLTA-202ENST00000345519 NFKBIAP25963 317 aa19.89■□□□□ 0.77
CLTA-202ENST00000345519 CTNNA2P26232 953 aa19.89■□□□□ 0.77
CLTA-202ENST00000345519 VIPR1P32241 457 aa19.89■□□□□ 0.77
CLTA-202ENST00000345519 RPL26P61254 145 aaKnown RBP19.89■□□□□ 0.77
CLTA-202ENST00000345519 DSC2Q02487 901 aa19.89■□□□□ 0.77
CLTA-202ENST00000345519 NIPAL4Q0D2K0 466 aa19.89■□□□□ 0.77
CLTA-202ENST00000345519 FOXC1Q12948 553 aa19.89■□□□□ 0.77
CLTA-202ENST00000345519 ZNF211Q13398 564 aaPredicted RBP19.89■□□□□ 0.77
CLTA-202ENST00000345519 CNGA3Q16281 694 aa19.89■□□□□ 0.77
CLTA-202ENST00000345519 ESRP1Q6NXG1 681 aaKnown RBP19.89■□□□□ 0.77
CLTA-202ENST00000345519 NPNTQ6UXI9 565 aa19.89■□□□□ 0.77
CLTA-202ENST00000345519 RCOR2Q8IZ40 523 aa19.89■□□□□ 0.77
CLTA-202ENST00000345519 RBM41Q96IZ5 413 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms