RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 KDELR1P24390 212 aa14.51□□□□□ -0.09
HMGN3-202ENST00000344726 HSPA9P38646 679 aaKnown RBP14.51□□□□□ -0.09
HMGN3-202ENST00000344726 GARSP41250 739 aaKnown RBP14.51□□□□□ -0.09
HMGN3-202ENST00000344726 MMP13P45452 471 aa14.51□□□□□ -0.09
HMGN3-202ENST00000344726 GBE1Q04446 702 aa14.51□□□□□ -0.09
HMGN3-202ENST00000344726 GALNT2Q10471 571 aa14.51□□□□□ -0.09
HMGN3-202ENST00000344726 SLC10A2Q12908 348 aaPredicted RBP14.51□□□□□ -0.09
HMGN3-202ENST00000344726 TRAF2Q12933 501 aa14.51□□□□□ -0.09
HMGN3-202ENST00000344726 TARDBPQ13148 414 aaKnown RBP eCLIP14.51□□□□□ -0.09
HMGN3-202ENST00000344726 IHHQ14623 411 aa14.51□□□□□ -0.09
HMGN3-202ENST00000344726 ERAP2Q6P179 960 aa14.51□□□□□ -0.09
HMGN3-202ENST00000344726 TEX26Q8N6G2 289 aa14.51□□□□□ -0.09
HMGN3-202ENST00000344726 RFFLQ8WZ73 363 aa14.51□□□□□ -0.09
HMGN3-202ENST00000344726 NLGN3Q9NZ94 848 aa14.51□□□□□ -0.09
HMGN3-202ENST00000344726 DKK4Q9UBT3 224 aa14.51□□□□□ -0.09
HMGN3-202ENST00000344726 LCMT1Q9UIC8 334 aa14.51□□□□□ -0.09
HMGN3-202ENST00000344726 FAM208BQ5VWN6 2430 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 C3orf70A6NLC5 250 aaPredicted RBP14.5□□□□□ -0.09
HMGN3-202ENST00000344726 A8MX80 341 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 SCAMP1O15126 338 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 CKMT1AP12532 417 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 ARHGAP25P42331 645 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 HNRNPKP61978 463 aaKnown RBP eCLIP14.5□□□□□ -0.09
HMGN3-202ENST00000344726 LRRC14Q15048 493 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 AGERQ15109 404 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 PTPRRQ15256 657 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 MARC1Q5VT66 337 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 KCTD16Q68DU8 428 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 LIPIQ6XZB0 460 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 DPPA4Q7L190 304 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 GAS2L3Q86XJ1 694 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 RHOT2Q8IXI1 618 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 PLA2G15Q8NCC3 412 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 MAML1Q92585 1016 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 FUBP1Q96AE4 644 aaKnown RBP14.5□□□□□ -0.09
HMGN3-202ENST00000344726 APOLD1Q96LR9 279 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 C1QTNF7Q9BXJ2 289 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 NT5MQ9NPB1 228 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 SCUBE2Q9NQ36 999 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 B4GALT6Q9UBX8 382 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 GPSM3Q9Y4H4 160 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 HYOU1Q9Y4L1 999 aa14.5□□□□□ -0.09
HMGN3-202ENST00000344726 NBEAQ8NFP9 2946 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.49□□□□□ -0.09
HMGN3-202ENST00000344726 CASC3O15234 703 aaKnown RBP14.49□□□□□ -0.09
HMGN3-202ENST00000344726 LZTS3O60299 673 aaPredicted RBP14.49□□□□□ -0.09
HMGN3-202ENST00000344726 SOCS5O75159 536 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 GCATO75600 419 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 JUPP14923 745 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 JUNDP17535 347 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 ZNF75DP51815 510 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 THOP1P52888 689 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 YPEL5P62699 121 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 DAB2P98082 770 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 ILKQ13418 452 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 TCEAL1Q15170 157 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 DEFB133Q30KQ1 61 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 FAM182AQ5T1J6 154 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 LRRC49Q8IUZ0 686 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 MAP7D3Q8IWC1 876 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 PELI3Q8N2H9 469 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 PLD5Q8N7P1 536 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 PDCD7Q8N8D1 485 aaKnown RBP14.49□□□□□ -0.09
HMGN3-202ENST00000344726 PDCD6IPQ8WUM4 868 aaKnown RBP14.49□□□□□ -0.09
HMGN3-202ENST00000344726 NSMCE1Q8WV22 266 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 RNF157Q96PX1 679 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 LRRC61Q9BV99 259 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 DTLQ9NZJ0 730 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 INTUQ9ULD6 942 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 TFR2Q9UP52 801 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 ADAMTS20P59510 1910 aa14.49□□□□□ -0.09
HMGN3-202ENST00000344726 LRRD1A4D1F6 860 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 CFAP69A5D8W1 941 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 MATN3O15232 486 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 AQP9O43315 295 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 RECQL5O94762 991 aaPredicted RBP14.48□□□□□ -0.09
HMGN3-202ENST00000344726 LCA5LO95447 670 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 CPP00450 1065 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 PCCBP05166 539 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 CELA2BP08218 269 aaPredicted RBP14.48□□□□□ -0.09
HMGN3-202ENST00000344726 PDHA1P08559 390 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 ELFN1P0C7U0 828 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 POLR2LP62875 67 aaKnown RBP14.48□□□□□ -0.09
HMGN3-202ENST00000344726 C1orf61Q13536 156 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 PTK2BQ14289 1009 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 INPP5AQ14642 412 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 IFI16Q16666 785 aaKnown RBP14.48□□□□□ -0.09
HMGN3-202ENST00000344726 ZFYVE27Q5T4F4 411 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 ALG1LQ6GMV1 187 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 C19orf48Q6RUI8 117 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 MACC1Q6ZN28 852 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 PHACTR4Q8IZ21 702 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 BBS5Q8N3I7 341 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 PAF1Q8N7H5 531 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 DCBLD1Q8N8Z6 715 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 FAM181AQ8N9Y4 354 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 LMX1AQ8TE12 382 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 TSGA13Q96PP4 275 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 SMIM14Q96QK8 99 aa14.48□□□□□ -0.09
HMGN3-202ENST00000344726 SEMA3CQ99985 751 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms