RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 WNT3AP56704 352 aa23.22■■□□□ 1.31
NKX2-3-201ENST00000344586 HECTD2Q5U5R9 776 aa23.22■■□□□ 1.31
NKX2-3-201ENST00000344586 TIGD7Q6NT04 549 aaPredicted RBP23.22■■□□□ 1.31
NKX2-3-201ENST00000344586 LARP4Q71RC2 724 aaKnown RBP eCLIP23.22■■□□□ 1.31
NKX2-3-201ENST00000344586 SLC22A9Q8IVM8 553 aa23.22■■□□□ 1.31
NKX2-3-201ENST00000344586 SCML4Q8N228 414 aa23.22■■□□□ 1.31
NKX2-3-201ENST00000344586 TIMMDC1Q9NPL8 285 aa23.22■■□□□ 1.31
NKX2-3-201ENST00000344586 TBC1D13Q9NVG8 400 aa23.22■■□□□ 1.31
NKX2-3-201ENST00000344586 HACD3Q9P035 362 aa23.22■■□□□ 1.31
NKX2-3-201ENST00000344586 ZNF839A8K0R7 811 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 HTRA2O43464 458 aaPredicted RBP23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 WISP3O95389 354 aaPredicted RBP23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 PCSK1P29120 753 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 LDLRAD1Q5T700 205 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 IRAK1BP1Q5VVH5 260 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 TLK2Q86UE8 772 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 TSPAN17Q96FV3 270 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 PAAF1Q9BRP4 392 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 SPON1Q9HCB6 807 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 FBRSL1Q9HCM7 1045 aaKnown RBP23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 OLAHQ9NV23 265 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 TRIP12Q14669 1992 aaPredicted RBP23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 FAM155AB1AL88 458 aaPredicted RBP23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 PLOD2O00469 737 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 MSI1O43347 362 aaKnown RBP23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 TRMUO75648 421 aaKnown RBP23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 TSPAN8P19075 237 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 ATP6V1B2P21281 511 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 BRMS1LQ5PSV4 323 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 TMEM207Q6UWW9 146 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 DHFR2Q86XF0 187 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 FUNDC1Q8IVP5 155 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 ANKFN1Q8N957 763 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 OR13J1Q8NGT2 312 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 SCAMP5Q8TAC9 235 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 FAM110BQ8TC76 370 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 GRIN3AQ8TCU5 1115 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 CALML6Q8TD86 181 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 TMIGD2Q96BF3 282 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 FCRL2Q96LA5 508 aaPredicted RBP23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 ANKRD60Q9BZ19 345 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 PNPLA3Q9NST1 481 aa23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 DUS2Q9NX74 493 aaKnown RBP23.21■■□□□ 1.31
NKX2-3-201ENST00000344586 ATP6AP2A0A1C7CYW4 349 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 TIPRLO75663 272 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 ATP6AP2O75787 350 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 THP07101 528 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 ALDOCP09972 364 aaKnown RBP23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 IMPDH1P20839 514 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 HTR7P34969 479 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 RANBP1P43487 201 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 TIGD5Q53EQ6 642 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 PITRM1Q5JRX3 1037 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 LPPQ93052 612 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 L3HYPDHQ96EM0 354 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 C3orf30Q96M34 536 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 PREBQ9HCU5 417 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 ATP13A1Q9HD20 1204 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 TMLHEQ9NVH6 421 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 RSL24D1Q9UHA3 163 aaKnown RBP23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 MYRFQ9Y2G1 1151 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 MTF2Q9Y483 593 aaPredicted RBP23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 CASTOR2A6NHX0 329 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 KCNC1P48547 511 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 ACADVLP49748 655 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 CDKN2DP55273 166 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 ZNF678Q5SXM1 525 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 FAM171BQ6P995 826 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 BEND5Q7L4P6 421 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 RETREG3Q86VR2 466 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 CILP2Q8IUL8 1156 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 TRIML2Q8N7C3 387 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 C19orf60Q96EN9 201 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 TRMOQ9BU70 441 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 EFHD1Q9BUP0 239 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 ALG9Q9H6U8 611 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 CAAP1Q9H8G2 361 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 ARNT2Q9HBZ2 717 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 SFMBT1Q9UHJ3 866 aa23.2■■□□□ 1.3
NKX2-3-201ENST00000344586 SOCS2O14508 198 aa23.19■■□□□ 1.3
NKX2-3-201ENST00000344586 CKMT2P17540 419 aa23.19■■□□□ 1.3
NKX2-3-201ENST00000344586 GPX3P22352 226 aa23.19■■□□□ 1.3
NKX2-3-201ENST00000344586 TBC1D25Q3MII6 688 aa23.19■■□□□ 1.3
NKX2-3-201ENST00000344586 NHSL2Q5HYW2 709 aa23.19■■□□□ 1.3
NKX2-3-201ENST00000344586 OLFML2BQ68BL8 750 aa23.19■■□□□ 1.3
NKX2-3-201ENST00000344586 KRT80Q6KB66 452 aa23.19■■□□□ 1.3
NKX2-3-201ENST00000344586 FIBCD1Q8N539 461 aa23.19■■□□□ 1.3
NKX2-3-201ENST00000344586 OR2T34Q8NGX1 318 aa23.19■■□□□ 1.3
NKX2-3-201ENST00000344586 OR2T3Q8NH03 318 aa23.19■■□□□ 1.3
NKX2-3-201ENST00000344586 ROPN1LQ96C74 230 aa23.19■■□□□ 1.3
NKX2-3-201ENST00000344586 RMND5BQ96G75 393 aaPredicted RBP23.19■■□□□ 1.3
NKX2-3-201ENST00000344586 FAM105AQ9NUU6 356 aa23.19■■□□□ 1.3
NKX2-3-201ENST00000344586 ARMC1Q9NVT9 282 aa23.19■■□□□ 1.3
NKX2-3-201ENST00000344586 PYGLP06737 847 aa23.18■■□□□ 1.3
NKX2-3-201ENST00000344586 BMP2P12643 396 aa23.18■■□□□ 1.3
NKX2-3-201ENST00000344586 PGFP49763 221 aa23.18■■□□□ 1.3
NKX2-3-201ENST00000344586 ERMP1Q7Z2K6 904 aa23.18■■□□□ 1.3
NKX2-3-201ENST00000344586 RTL3Q8N8U3 475 aaKnown RBP23.18■■□□□ 1.3
NKX2-3-201ENST00000344586 SH3RF2Q8TEC5 729 aa23.18■■□□□ 1.3
NKX2-3-201ENST00000344586 CANT1Q8WVQ1 401 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms