RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 NDUFAF2Q8N183 169 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 CCNYQ8ND76 341 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 ZNF548Q8NEK5 533 aaPredicted RBP16.15■□□□□ 0.18
ATG4B-201ENST00000344376 MAML1Q92585 1016 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 TSGA13Q96PP4 275 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 SLC13A1Q9BZW2 595 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 SPASTQ9UBP0 616 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 B4GALT6Q9UBX8 382 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 APOBEC3BQ9UH17 382 aaKnown RBP16.15■□□□□ 0.18
ATG4B-201ENST00000344376 PHTF1Q9UMS5 762 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 TTLL3Q9Y4R7 772 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 CSNK1G3Q9Y6M4 447 aa16.15■□□□□ 0.18
ATG4B-201ENST00000344376 APOL1O14791 398 aa16.14■□□□□ 0.17
ATG4B-201ENST00000344376 IPO7O95373 1038 aaKnown RBP16.14■□□□□ 0.17
ATG4B-201ENST00000344376 PCCBP05166 539 aa16.14■□□□□ 0.17
ATG4B-201ENST00000344376 CYP2A6P11509 494 aaPredicted RBP16.14■□□□□ 0.17
ATG4B-201ENST00000344376 TNNT1P13805 278 aa16.14■□□□□ 0.17
ATG4B-201ENST00000344376 ZFXP17010 805 aaPredicted RBP16.14■□□□□ 0.17
ATG4B-201ENST00000344376 CA4P22748 312 aa16.14■□□□□ 0.17
ATG4B-201ENST00000344376 HNF1BP35680 557 aa16.14■□□□□ 0.17
ATG4B-201ENST00000344376 EIF2B5Q13144 721 aaKnown RBP16.14■□□□□ 0.17
ATG4B-201ENST00000344376 MTM1Q13496 603 aa16.14■□□□□ 0.17
ATG4B-201ENST00000344376 SMAD1Q15797 465 aaKnown RBP16.14■□□□□ 0.17
ATG4B-201ENST00000344376 TPRG1LQ5T0D9 272 aa16.14■□□□□ 0.17
ATG4B-201ENST00000344376 LIPIQ6XZB0 460 aa16.14■□□□□ 0.17
ATG4B-201ENST00000344376 KDM7AQ6ZMT4 941 aa16.14■□□□□ 0.17
ATG4B-201ENST00000344376 PHACTR4Q8IZ21 702 aa16.14■□□□□ 0.17
ATG4B-201ENST00000344376 HDAC11Q96DB2 347 aa16.14■□□□□ 0.17
ATG4B-201ENST00000344376 PANX2Q96RD6 677 aa16.14■□□□□ 0.17
ATG4B-201ENST00000344376 SEMA3CQ99985 751 aa16.14■□□□□ 0.17
ATG4B-201ENST00000344376 TMEM121BQ9BXQ6 578 aaPredicted RBP16.14■□□□□ 0.17
ATG4B-201ENST00000344376 RBM22Q9NW64 420 aaKnown RBP eCLIP16.14■□□□□ 0.174e-6■□□□□ 10.3
ATG4B-201ENST00000344376 KCTD5Q9NXV2 234 aa16.14■□□□□ 0.17
ATG4B-201ENST00000344376 DTLQ9NZJ0 730 aa16.14■□□□□ 0.17
ATG4B-201ENST00000344376 AQP9O43315 295 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 RECQL5O94762 991 aaPredicted RBP16.13■□□□□ 0.17
ATG4B-201ENST00000344376 PGLSO95336 258 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 LCA5LO95447 670 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 CCNB1P14635 433 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 COMTP21964 271 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 ACP1P24666 158 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 VIPR1P32241 457 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 BLKP51451 505 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 PPARDQ03181 441 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 TRAF2Q12933 501 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 INPP5AQ14642 412 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 ACOX1Q15067 660 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 FAXCQ5TGI0 409 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 USP45Q70EL2 814 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 TMPRSS12Q86WS5 348 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 CCDC13Q8IYE1 715 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 LMX1AQ8TE12 382 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 TBATAQ96M53 351 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 NSMCE3Q96MG7 304 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 USP29Q9HBJ7 922 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 NCKIPSDQ9NZQ3 722 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 PCDHA13Q9Y5I0 950 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 HEY1Q9Y5J3 304 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 RAI2Q9Y5P3 530 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 A8MX80 341 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 PSTPIP1O43586 416 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 DUSP3P51452 185 aaPredicted RBP16.13■□□□□ 0.17
ATG4B-201ENST00000344376 HADHBP55084 474 aaKnown RBP16.13■□□□□ 0.17
ATG4B-201ENST00000344376 ARHGEF7Q14155 803 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 NFATC4Q14934 902 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 SLC9A4Q6AI14 798 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 GAS2L3Q86XJ1 694 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 RFX6Q8HWS3 928 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 TMTC1Q8IUR5 882 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 KDF1Q8NAX2 398 aaPredicted RBP16.13■□□□□ 0.17
ATG4B-201ENST00000344376 ZCCHC14Q8WYQ9 949 aaKnown RBP16.13■□□□□ 0.17
ATG4B-201ENST00000344376 IL12RB2Q99665 862 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 APOOQ9BUR5 198 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 KLF15Q9UIH9 416 aa16.13■□□□□ 0.17
ATG4B-201ENST00000344376 K7ESM1 405 aa16.12■□□□□ 0.17
ATG4B-201ENST00000344376 CACNB4O00305 520 aaPredicted RBP16.12■□□□□ 0.17
ATG4B-201ENST00000344376 PPP1R12AO14974 1030 aaPredicted RBP16.12■□□□□ 0.17
ATG4B-201ENST00000344376 CKMT1AP12532 417 aa16.12■□□□□ 0.17
ATG4B-201ENST00000344376 EPHB1P54762 984 aa16.12■□□□□ 0.17
ATG4B-201ENST00000344376 PPIDQ08752 370 aaKnown RBP16.12■□□□□ 0.17
ATG4B-201ENST00000344376 PDK1Q15118 436 aa16.12■□□□□ 0.17
ATG4B-201ENST00000344376 PRRT3Q5FWE3 981 aa16.12■□□□□ 0.17
ATG4B-201ENST00000344376 ALG1LQ6GMV1 187 aa16.12■□□□□ 0.17
ATG4B-201ENST00000344376 ZCCHC8Q6NZY4 707 aaKnown RBP16.12■□□□□ 0.17
ATG4B-201ENST00000344376 RBFAQ8N0V3 343 aa16.12■□□□□ 0.17
ATG4B-201ENST00000344376 PLD5Q8N7P1 536 aa16.12■□□□□ 0.17
ATG4B-201ENST00000344376 FAM181AQ8N9Y4 354 aa16.12■□□□□ 0.17
ATG4B-201ENST00000344376 TPCN2Q8NHX9 752 aa16.12■□□□□ 0.17
ATG4B-201ENST00000344376 RNF25Q96BH1 459 aaPredicted RBP16.12■□□□□ 0.17
ATG4B-201ENST00000344376 WDR92Q96MX6 357 aa16.12■□□□□ 0.17
ATG4B-201ENST00000344376 HYOU1Q9Y4L1 999 aa16.12■□□□□ 0.17
ATG4B-201ENST00000344376 OR1A2Q9Y585 309 aa16.12■□□□□ 0.17
ATG4B-201ENST00000344376 A0A0A6YYK5 440 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-201ENST00000344376 GOLGA6L3A6NEY3 463 aa16.11■□□□□ 0.17
ATG4B-201ENST00000344376 C3orf70A6NLC5 250 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-201ENST00000344376 PSMD11O00231 422 aa16.11■□□□□ 0.17
ATG4B-201ENST00000344376 TPP1O14773 563 aa16.11■□□□□ 0.17
ATG4B-201ENST00000344376 HEXIM1O94992 359 aaKnown RBP16.11■□□□□ 0.17
ATG4B-201ENST00000344376 RASGRP1O95267 797 aa16.11■□□□□ 0.17
ATG4B-201ENST00000344376 HLA-DQB2P05538 268 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms