RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 LIPMQ5VYY2 423 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 SLC16A12Q6ZSM3 486 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 HDDC2Q7Z4H3 204 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 ZBTB46Q86UZ6 589 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 MAP4K3Q8IVH8 894 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 C8orf59Q8N0T1 100 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-201ENST00000343524 TAB3Q8N5C8 712 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-201ENST00000343524 POC5Q8NA72 575 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 OR13J1Q8NGT2 312 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 MAPK15Q8TD08 544 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 CANT1Q8WVQ1 401 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 FKBP10Q96AY3 582 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 ERLEC1Q96DZ1 483 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 TWNKQ96RR1 684 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 CPNE1Q99829 537 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 CNPY3Q9BT09 278 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 TEKT3Q9BXF9 490 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 PCDHAC1Q9H158 963 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 MRM3Q9HC36 420 aaKnown RBP8.17□□□□□ -1.1
ATG4A-201ENST00000343524 ATP13A2Q9NQ11 1180 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 TMEM216Q9P0N5 145 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 DGKBQ9Y6T7 804 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 A3GALT2U3KPV4 340 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 ARID2Q68CP9 1835 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 A6NL46 340 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 TCP10L2B9ZVM9 353 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 EI24O14681 340 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 MRASO14807 208 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 PDPK1O15530 556 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 TMCC2O75069 709 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 IL18RAPO95256 599 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 NDST3O95803 873 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 HPRP00739 348 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 APRTP07741 180 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 TCF4P15884 667 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 NAGAP17050 411 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 PGAM1P18669 254 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 RPL10P27635 214 aaKnown RBP8.17□□□□□ -1.1
ATG4A-201ENST00000343524 ARRB2P32121 409 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 SPRP35270 261 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-201ENST00000343524 PLA2G5P39877 138 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 ATP4BP51164 291 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 NKX2-5P52952 324 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-201ENST00000343524 MAPK10P53779 464 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 RHBDL3P58872 404 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 TSPY1Q01534 308 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 ZNF45Q02386 682 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 POLD3Q15054 466 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-201ENST00000343524 C2CD6Q53TS8 623 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 UBE2UQ5VVX9 321 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 TTC23Q5W5X9 447 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 FAM122CQ6P4D5 195 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 CYP2R1Q6VVX0 501 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 THAP5Q7Z6K1 395 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 TBC1D21Q8IYX1 336 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 OFCC1Q8IZS5 231 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 DAW1Q8N136 415 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 GPD1LQ8N335 351 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 CCDC24Q8N4L8 307 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 NATD1Q8N6N6 113 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 FAM156AQ8NDB6 213 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 SHCBP1Q8NEM2 672 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 PSMA8Q8TAA3 256 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 HTRA1Q92743 480 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 SLC39A13Q96H72 371 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 SIGLEC10Q96LC7 697 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 CEP19Q96LK0 163 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 C8orf48Q96LL4 319 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 MYRFLQ96LU7 910 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 VPS35Q96QK1 796 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 CSF3RQ99062 836 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 HOPXQ9BPY8 73 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-201ENST00000343524 LXNQ9BS40 222 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 C2orf49Q9BVC5 232 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-201ENST00000343524 ASPSCR1Q9BZE9 553 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 DSN1Q9H410 356 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 LRRC40Q9H9A6 602 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 AS3MTQ9HBK9 375 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 SYTL2Q9HCH5 934 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 C12orf4Q9NQ89 552 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 RBAKQ9NYW8 714 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-201ENST00000343524 TNFRSF10DQ9UBN6 386 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 OAZ3Q9UMX2 235 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 AURKCQ9UQB9 309 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 ANKRD6Q9Y2G4 727 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 COL4A5P29400 1685 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 CROCCQ5TZA2 2017 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 IGLV3-22A0A075B6J6 115 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 GOLGA8IPA6NC78 632 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 PRORSD1PA6NEY8 169 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 GOLGA8JA6NMD2 632 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 ZNF99A8MXY4 864 aaPredicted RBP8.16□□□□□ -1.1
ATG4A-201ENST00000343524 H0Y626 953 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 ZBTB39O15060 712 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 BET1O15155 118 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 KCNN4O15554 427 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 CHMP2AO43633 222 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 NDUFS2O75306 463 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 CABYRO75952 493 aa8.16□□□□□ -1.1
ATG4A-201ENST00000343524 LDLRP01130 860 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms