RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 SFRP1Q8N474 314 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 C17orf50Q8WW18 174 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 SEPT1Q8WYJ6 367 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 NT5C3BQ969T7 300 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 UBXN10Q96LJ8 280 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 C12orf42Q96LP6 360 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 GLT1D1Q96MS3 346 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 TEPSINQ96N21 525 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 CYP2S1Q96SQ9 504 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 CSF3RQ99062 836 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 MRPL45Q9BRJ2 306 aaKnown RBP9.72□□□□□ -0.85
HOXA1-201ENST00000343060 RAD21L1Q9H4I0 556 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 AKIP1Q9NQ31 210 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 IGSF5Q9NSI5 407 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 PRMT7Q9NVM4 692 aaPredicted RBP9.72□□□□□ -0.85
HOXA1-201ENST00000343060 DNMT3BQ9UBC3 853 aaKnown RBP9.72□□□□□ -0.85
HOXA1-201ENST00000343060 TRHDEQ9UKU6 1024 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 MAGED2Q9UNF1 606 aaPredicted RBP9.72□□□□□ -0.85
HOXA1-201ENST00000343060 NDUFAF1Q9Y375 327 aa9.72□□□□□ -0.85
HOXA1-201ENST00000343060 RALGAPA2Q2PPJ7 1873 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 A8MT66 165 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 CLDN25C9JDP6 229 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 H0Y858 1186 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 ZBTB24O43167 697 aaPredicted RBP9.71□□□□□ -0.85
HOXA1-201ENST00000343060 MTSS1O43312 755 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 ABCB7O75027 752 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 GPC4O75487 556 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 DAB1O75553 588 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 JRKO75564 520 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 OXSR1O95747 527 aaPredicted RBP9.71□□□□□ -0.85
HOXA1-201ENST00000343060 IQCF3P0C7M6 154 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 EDNRBP24530 442 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 NOS2P35228 1153 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 ETFBP38117 255 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 OPRL1P41146 370 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 ACADSBP45954 432 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 BCAT1P54687 386 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 ZNF460Q14592 562 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 BROXQ5VW32 411 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 NEPROQ6NW34 567 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 SLC2A7Q6PXP3 512 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 TFAP2DQ7Z6R9 452 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 PTRH1Q86Y79 214 aaKnown RBP9.71□□□□□ -0.85
HOXA1-201ENST00000343060 SPPL2CQ8IUH8 684 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 PARP8Q8N3A8 854 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 SNX31Q8N9S9 440 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 ABHD11Q8NFV4 315 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 HEXDCQ8WVB3 486 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 DPF3Q92784 378 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 FKBP10Q96AY3 582 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 SH3YL1Q96HL8 342 aaPredicted RBP9.71□□□□□ -0.85
HOXA1-201ENST00000343060 CPB2Q96IY4 423 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 BTN2A3PQ96KV6 586 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 OMDQ99983 421 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 MTG1Q9BT17 334 aaPredicted RBP9.71□□□□□ -0.85
HOXA1-201ENST00000343060 HGH1Q9BTY7 390 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 TRMOQ9BU70 441 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 WDR12Q9GZL7 423 aaKnown RBP9.71□□□□□ -0.85
HOXA1-201ENST00000343060 FANCEQ9HB96 536 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 TLR9Q9NR96 1032 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 CMTM6Q9NX76 183 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 DPP3Q9NY33 737 aa9.71□□□□□ -0.85
HOXA1-201ENST00000343060 COL4A5P29400 1685 aa9.71□□□□□ -0.86
HOXA1-201ENST00000343060 NRCAMQ92823 1304 aa9.71□□□□□ -0.86
HOXA1-201ENST00000343060 C1orf232A0A0U1RR37 186 aa9.71□□□□□ -0.86
HOXA1-201ENST00000343060 NCAM2O15394 837 aa9.71□□□□□ -0.86
HOXA1-201ENST00000343060 ALDOCP09972 364 aaKnown RBP9.71□□□□□ -0.86
HOXA1-201ENST00000343060 GSTM2P28161 218 aa9.71□□□□□ -0.86
HOXA1-201ENST00000343060 BACE1P56817 501 aa9.71□□□□□ -0.86
HOXA1-201ENST00000343060 CDH17Q12864 832 aa9.71□□□□□ -0.86
HOXA1-201ENST00000343060 TMEM132AQ24JP5 1023 aa9.71□□□□□ -0.86
HOXA1-201ENST00000343060 INTS6LQ5JSJ4 861 aaKnown RBP9.71□□□□□ -0.86
HOXA1-201ENST00000343060 METTL7BQ6UX53 244 aa9.71□□□□□ -0.86
HOXA1-201ENST00000343060 UNC93AQ86WB7 457 aa9.71□□□□□ -0.86
HOXA1-201ENST00000343060 IFNLR1Q8IU57 520 aaPredicted RBP9.71□□□□□ -0.86
HOXA1-201ENST00000343060 TBC1D21Q8IYX1 336 aa9.71□□□□□ -0.86
HOXA1-201ENST00000343060 CADM3Q8N126 398 aa9.71□□□□□ -0.86
HOXA1-201ENST00000343060 HDAC11Q96DB2 347 aa9.71□□□□□ -0.86
HOXA1-201ENST00000343060 NRBF2Q96F24 287 aa9.71□□□□□ -0.86
HOXA1-201ENST00000343060 DAPK2Q9UIK4 370 aa9.71□□□□□ -0.86
HOXA1-201ENST00000343060 CITO14578 2027 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 SCN1AP35498 2009 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 NEMP2A6NFY4 417 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 CACNG3O60359 315 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 IPO13O94829 963 aaKnown RBP9.7□□□□□ -0.86
HOXA1-201ENST00000343060 UMPSP11172 480 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 PABPC1P11940 636 aaKnown RBP9.7□□□□□ -0.86
HOXA1-201ENST00000343060 PTPN2P17706 415 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 SAT1P21673 171 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 KCNA5P22460 613 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 S100A1P23297 94 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 SLC6A2P23975 617 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 ARNTP27540 789 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 HPCAL1P37235 193 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 YAP1P46937 504 aaKnown RBP9.7□□□□□ -0.86
HOXA1-201ENST00000343060 SULT1E1P49888 294 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 STX1BP61266 288 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 POU5F1BQ06416 359 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 SEMA3BQ13214 749 aa9.7□□□□□ -0.86
HOXA1-201ENST00000343060 PHKG1Q16816 387 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms