RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 S1PR4O95977 384 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 RB1P06400 928 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 DLDP09622 509 aaKnown RBP20.07■□□□□ 0.8
RTN1-202ENST00000342503 COL6A2P12110 1019 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 ZNF140P52738 457 aaPredicted RBP20.07■□□□□ 0.8
RTN1-202ENST00000342503 ARFIP2P53365 341 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 NTHL1P78549 312 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 TAF1AQ15573 450 aaPredicted RBP20.07■□□□□ 0.8
RTN1-202ENST00000342503 RETSATQ6NUM9 610 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 GLT6D1Q7Z4J2 308 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 GBP7Q8N8V2 638 aaPredicted RBP20.07■□□□□ 0.8
RTN1-202ENST00000342503 PDCD6IPQ8WUM4 868 aaKnown RBP20.07■□□□□ 0.8
RTN1-202ENST00000342503 USP13Q92995 863 aaPredicted RBP20.07■□□□□ 0.8
RTN1-202ENST00000342503 NDNQ99608 321 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 LBHD1Q9BQE6 289 aaPredicted RBP20.07■□□□□ 0.8
RTN1-202ENST00000342503 TMEM120AQ9BXJ8 343 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 MYLK2Q9H1R3 596 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 NLE1Q9NVX2 485 aaPredicted RBP20.07■□□□□ 0.8
RTN1-202ENST00000342503 ITM2AO43736 263 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 GLP2RO95838 553 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 CYBBP04839 570 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 SERPINE1P05121 402 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 RALBP11234 206 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 HOXA9P31269 272 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 SLC12A2P55011 1212 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 SETDB1Q15047 1291 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 LCA5Q86VQ0 697 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 CRLF3Q8IUI8 442 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 C10orf67Q8IYJ2 551 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 CENPLQ8N0S6 344 aaPredicted RBP20.07■□□□□ 0.8
RTN1-202ENST00000342503 GPR150Q8NGU9 434 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 CDKN2AIPNLQ96HQ2 116 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 ADGRE3Q9BY15 652 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 CAPN7Q9Y6W3 813 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 MYOFQ9NZM1 2061 aa20.07■□□□□ 0.8
RTN1-202ENST00000342503 ANKRD66B4E2M5 251 aa20.06■□□□□ 0.8
RTN1-202ENST00000342503 PER2O15055 1255 aa20.06■□□□□ 0.8
RTN1-202ENST00000342503 CD3EAPO15446 510 aaKnown RBP20.06■□□□□ 0.8
RTN1-202ENST00000342503 SMAD6O43541 496 aaKnown RBP20.06■□□□□ 0.8
RTN1-202ENST00000342503 LYPLA1O75608 230 aaPredicted RBP20.06■□□□□ 0.8
RTN1-202ENST00000342503 APOA4P06727 396 aa20.06■□□□□ 0.8
RTN1-202ENST00000342503 HNRNPA1P09651 372 aaKnown RBP eCLIP20.06■□□□□ 0.8
RTN1-202ENST00000342503 SLC8A1P32418 973 aa20.06■□□□□ 0.8
RTN1-202ENST00000342503 SLC1A6P48664 564 aa20.06■□□□□ 0.8
RTN1-202ENST00000342503 DLG1Q12959 904 aa20.06■□□□□ 0.8
RTN1-202ENST00000342503 BNIP1Q12981 228 aa20.06■□□□□ 0.8
RTN1-202ENST00000342503 RALGPS1Q5JS13 557 aa20.06■□□□□ 0.8
RTN1-202ENST00000342503 ZNF697Q5TEC3 545 aa20.06■□□□□ 0.8
RTN1-202ENST00000342503 ACDQ96AP0 544 aa20.06■□□□□ 0.8
RTN1-202ENST00000342503 SCYL1Q96KG9 808 aa20.06■□□□□ 0.8
RTN1-202ENST00000342503 OLFM1Q99784 485 aa20.06■□□□□ 0.8
RTN1-202ENST00000342503 INTS6Q9UL03 887 aaKnown RBP20.06■□□□□ 0.8
RTN1-202ENST00000342503 LAMA2P24043 3122 aaKnown RBP20.06■□□□□ 0.8
RTN1-202ENST00000342503 A0A087X1B8 175 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 DNAJC6O75061 913 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 XYLBO75191 536 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 ABL2P42684 1182 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 MAGEA9P43362 315 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 ITGA9Q13797 1035 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 SEMA3AQ14563 771 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 PLEKHG6Q3KR16 790 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 PRSS36Q5K4E3 855 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 HECTD2Q5U5R9 776 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 FAM109BQ6ICB4 259 aaPredicted RBP20.05■□□□□ 0.8
RTN1-202ENST00000342503 CCDC91Q7Z6B0 441 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 ARID3BQ8IVW6 561 aaPredicted RBP20.05■□□□□ 0.8
RTN1-202ENST00000342503 OR4K2Q8NGD2 314 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 OR4L1Q8NH43 312 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 NXNL1Q96CM4 212 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 ERP27Q96DN0 273 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 LMLNQ96KR4 655 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 LRRC37BQ96QE4 947 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 TM6SF2Q9BZW4 377 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 CATSPERZQ9NTU4 200 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 TDP1Q9NUW8 608 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 CPSF2Q9P2I0 782 aaKnown RBP20.05■□□□□ 0.8
RTN1-202ENST00000342503 MID2Q9UJV3 735 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 C2orf81A6NN90 581 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 FZD6O60353 706 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 KLHL2O95198 593 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 SLC4A1P02730 911 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 SBK3P0C264 359 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 KITP10721 976 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 GRK2P25098 689 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 GLRBP48167 497 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 PLK1P53350 603 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 LRRC8EQ6NSJ5 796 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 MRNIPQ6NTE8 343 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 GRASPQ7Z6J2 395 aaPredicted RBP20.05■□□□□ 0.8
RTN1-202ENST00000342503 MICALL1Q8N3F8 863 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 TMEM151AQ8N4L1 468 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 EFHBQ8N7U6 833 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 LEMD2Q8NC56 503 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 OR6Y1Q8NGX8 325 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 GPR78Q96P69 363 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 ABCB8Q9NUT2 735 aa20.05■□□□□ 0.8
RTN1-202ENST00000342503 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.05■□□□□ 0.8
RTN1-202ENST00000342503 TK2O00142 265 aa20.04■□□□□ 0.8
RTN1-202ENST00000342503 CA3P07451 260 aa20.04■□□□□ 0.8
RTN1-202ENST00000342503 MYL2P10916 166 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms