RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 LIMK2P53671 638 aa16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 AGERQ15109 404 aa16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 DEFB109BQ30KR1 87 aa16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 LACTB2Q53H82 288 aaPredicted RBP16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 C2CD6Q53TS8 623 aa16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 KLHL10Q6JEL2 608 aa16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 TRIM65Q6PJ69 517 aa16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 ZSWIM9Q86XI8 627 aa16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 NRROSQ86YC3 692 aa16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 FMR1NBQ8N0W7 255 aaPredicted RBP16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 SHC3Q92529 594 aa16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 SNX21Q969T3 373 aa16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 HMCESQ96FZ2 354 aa16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 DHTKD1Q96HY7 919 aaPredicted RBP16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 EXOC2Q96KP1 924 aa16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 GDAP1L1Q96MZ0 367 aa16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 SPRY4Q9C004 299 aa16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 CYP4F12Q9HCS2 524 aa16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 SLC39A1Q9NY26 324 aa16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 PILRAQ9UKJ1 303 aa16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 MFHAS1Q9Y4C4 1052 aa16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 RP1L1Q8IWN7 2480 aaPredicted RBP16.46■□□□□ 0.23
NECTIN1-202ENST00000340882 ENO4A6NNW6 628 aa16.45■□□□□ 0.22
NECTIN1-202ENST00000340882 PSMA7O14818 248 aa16.45■□□□□ 0.22
NECTIN1-202ENST00000340882 FGF1P05230 155 aa16.45■□□□□ 0.22
NECTIN1-202ENST00000340882 CLCN1P35523 988 aa16.45■□□□□ 0.22
NECTIN1-202ENST00000340882 KIAA1024LP59773 190 aa16.45■□□□□ 0.22
NECTIN1-202ENST00000340882 MTM1Q13496 603 aa16.45■□□□□ 0.22
NECTIN1-202ENST00000340882 NR1D2Q14995 579 aa16.45■□□□□ 0.22
NECTIN1-202ENST00000340882 FAM102AQ5T9C2 384 aaPredicted RBP16.45■□□□□ 0.22
NECTIN1-202ENST00000340882 ANKS6Q68DC2 871 aa16.45■□□□□ 0.22
NECTIN1-202ENST00000340882 ENOSF1Q7L5Y1 443 aa16.45■□□□□ 0.22
NECTIN1-202ENST00000340882 TIPARPQ7Z3E1 657 aaKnown RBP16.45■□□□□ 0.22
NECTIN1-202ENST00000340882 SLC47A2Q86VL8 602 aa16.45■□□□□ 0.22
NECTIN1-202ENST00000340882 XYLT1Q86Y38 959 aa16.45■□□□□ 0.22
NECTIN1-202ENST00000340882 ATL2Q8NHH9 583 aa16.45■□□□□ 0.22
NECTIN1-202ENST00000340882 DDA1Q9BW61 102 aa16.45■□□□□ 0.22
NECTIN1-202ENST00000340882 NOL6Q9H6R4 1146 aaKnown RBP16.45■□□□□ 0.22
NECTIN1-202ENST00000340882 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.45■□□□□ 0.22
NECTIN1-202ENST00000340882 ST14Q9Y5Y6 855 aa16.45■□□□□ 0.22
NECTIN1-202ENST00000340882 SHANK1Q9Y566 2161 aa16.45■□□□□ 0.22
NECTIN1-202ENST00000340882 PPP1R3GB7ZBB8 358 aa16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 BUB1O43683 1085 aa16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 KDELR3O43731 214 aa16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 ECEL1O95672 775 aa16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 FUCA1P04066 466 aa16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 GM2AP17900 193 aa16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 BMP6P22004 513 aa16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 GEMIN4P57678 1058 aaKnown RBP16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 ELP6Q0PNE2 266 aa16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 KLRB1Q12918 225 aa16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 UGP2Q16851 508 aa16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 ACBD5Q5T8D3 534 aaPredicted RBP16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 RWDD4Q6NW29 188 aaKnown RBP16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 ATCAYQ86WG3 371 aa16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 ZDHHC17Q8IUH5 632 aa16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 BMPERQ8N8U9 685 aa16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 APOBEC4Q8WW27 367 aaKnown RBP16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 SMARCE1Q969G3 411 aa16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 MAGEH1Q9H213 219 aa16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 SUDS3Q9H7L9 328 aaPredicted RBP16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 GPN2Q9H9Y4 310 aaPredicted RBP16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 TMEM248Q9NWD8 314 aa16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 LHX3Q9UBR4 397 aa16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 OR12D3Q9UGF7 316 aa16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 MOSPD1Q9UJG1 213 aa16.44■□□□□ 0.22
NECTIN1-202ENST00000340882 ESPL1Q14674 2120 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 TSPAN11A1L157 253 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 EFCAB7A8K855 629 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 RHPN2P1A8MT19 583 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 PPM1DO15297 605 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 AGFG2O95081 481 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 IGSF6O95976 241 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 HSP90AA1P07900 732 aaKnown RBP16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 THRAP10827 490 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 RHOQP17081 205 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 GNLYP22749 145 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 XPAP23025 273 aaPredicted RBP16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 AK4P27144 223 aaPredicted RBP16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 KRT9P35527 623 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 ETFBP38117 255 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 MMP12P39900 470 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 GABRB2P47870 512 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 MAPKAPK2P49137 400 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 MARSP56192 900 aaKnown RBP16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 STX17P56962 302 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 RHOAP61586 193 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 RAD51Q06609 339 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 RALGDSQ12967 914 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 AGBL5Q8NDL9 886 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 ZDHHC1Q8WTX9 485 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 PTCD2Q8WV60 388 aaKnown RBP16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 NELFBQ8WX92 580 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 CTRCQ99895 268 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 TMEM59LQ9UK28 342 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 MAN1B1Q9UKM7 699 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 HPCAL4Q9UM19 191 aa16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 MRPS18BQ9Y676 258 aaKnown RBP16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 ZNF106Q9H2Y7 1883 aaKnown RBP16.43■□□□□ 0.22
NECTIN1-202ENST00000340882 PRSS38A1L453 326 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms