RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 TRIM49D1C9J1S8 452 aa15.21■□□□□ 0.03
BRAT1-201ENST00000340611 KCNK1O00180 336 aa15.21■□□□□ 0.03
BRAT1-201ENST00000340611 COPEO14579 308 aa15.21■□□□□ 0.03
BRAT1-201ENST00000340611 NSUN2Q08J23 767 aaKnown RBP eCLIP15.21■□□□□ 0.03
BRAT1-201ENST00000340611 LRP8Q14114 963 aa15.21■□□□□ 0.03
BRAT1-201ENST00000340611 RABGAP1LQ5R372 815 aa15.21■□□□□ 0.03
BRAT1-201ENST00000340611 STXBP5Q5T5C0 1151 aa15.21■□□□□ 0.03
BRAT1-201ENST00000340611 FAAH2Q6GMR7 532 aa15.21■□□□□ 0.03
BRAT1-201ENST00000340611 ELMSAN1Q6PJG2 1045 aa15.21■□□□□ 0.03
BRAT1-201ENST00000340611 ARHGAP36Q6ZRI8 547 aa15.21■□□□□ 0.03
BRAT1-201ENST00000340611 CFAP36Q96G28 342 aa15.21■□□□□ 0.03
BRAT1-201ENST00000340611 VPS50Q96JG6 964 aa15.21■□□□□ 0.03
BRAT1-201ENST00000340611 SACM1LQ9NTJ5 587 aa15.21■□□□□ 0.03
BRAT1-201ENST00000340611 F8W8V4 182 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 S100BP04271 92 aaPredicted RBP15.2■□□□□ 0.02
BRAT1-201ENST00000340611 CDH2P19022 906 aaPredicted RBP15.2■□□□□ 0.02
BRAT1-201ENST00000340611 IRX4P78413 519 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 PDK1Q15118 436 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 TRMT5Q32P41 509 aaKnown RBP15.2■□□□□ 0.02
BRAT1-201ENST00000340611 RAP1GAP2Q684P5 730 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 ZCCHC23Q6ZST2 131 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 PEX5LQ8IYB4 626 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 PPM1NQ8N819 430 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 DDHD1Q8NEL9 900 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 SPPL3Q8TCT6 385 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 NTAN1Q96AB6 310 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 SLC9A7Q96T83 725 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 HTATIP2Q9BUP3 242 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 S100A14Q9HCY8 104 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 ZNF840PA6NDX5 716 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 CCL16O15467 120 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 COCHO43405 550 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 STIP1P31948 543 aaKnown RBP15.2■□□□□ 0.02
BRAT1-201ENST00000340611 CYP4F8P98187 520 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 SLC25A3Q00325 362 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 BMPR2Q13873 1038 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 CHI3L2Q15782 390 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 ZNF423Q2M1K9 1284 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 TXNDC8Q6A555 127 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 POTEHQ6S545 545 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 CFAP52Q8N1V2 620 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 TTC13Q8NBP0 860 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 EBF4Q9BQW3 602 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 SHCBP1LQ9BZQ2 653 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 PRDM12Q9H4Q4 367 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 SIAEQ9HAT2 523 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 TAGLN3Q9UI15 199 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 BPTFQ12830 3046 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 DCLK1O15075 740 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 CNTN5O94779 1100 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 CDH3P22223 829 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 DEPDC1Q5TB30 811 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 PCGF5Q86SE9 256 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 TMEM150AQ86TG1 271 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 ST13P5Q8NFI4 369 aaPredicted RBP15.2■□□□□ 0.02
BRAT1-201ENST00000340611 C2orf15Q8WU43 125 aaKnown RBP15.2■□□□□ 0.02
BRAT1-201ENST00000340611 SERPINB11Q96P15 392 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 KLHL5Q96PQ7 755 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 FETUBQ9UGM5 382 aa15.2■□□□□ 0.02
BRAT1-201ENST00000340611 YBX2Q9Y2T7 364 aaKnown RBP15.2■□□□□ 0.02
BRAT1-201ENST00000340611 COL4A4P53420 1690 aaPredicted RBP15.19■□□□□ 0.02
BRAT1-201ENST00000340611 TMX2-CTNND1H3BSU7 103 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 NAT2P11245 290 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 ENDOUP21128 410 aaKnown RBP15.19■□□□□ 0.02
BRAT1-201ENST00000340611 SCAPQ12770 1279 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 FAM209AQ5JX71 171 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 ARTNQ5T4W7 220 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 SH2D5Q6ZV89 423 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 LPCAT2Q7L5N7 544 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 CROCCP3Q8IVE0 287 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 CENPSQ8N2Z9 138 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 ACTRT2Q8TDY3 377 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 BHMTQ93088 406 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 C20orf27Q9GZN8 174 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 TBC1D23Q9NUY8 699 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 PIH1D1Q9NWS0 290 aaKnown RBP15.19■□□□□ 0.02
BRAT1-201ENST00000340611 NEU3Q9UQ49 428 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 CEPT1Q9Y6K0 416 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 KCNU1A8MYU2 1149 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 TOP3BO95985 862 aaKnown RBP15.19■□□□□ 0.02
BRAT1-201ENST00000340611 TGM2P21980 687 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 SLC18A2Q05940 514 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 SMARCB1Q12824 385 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 ALFQ53S48 1182 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 TPGS2Q68CL5 300 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 SP7Q8TDD2 431 aaPredicted RBP15.19■□□□□ 0.02
BRAT1-201ENST00000340611 SLC44A1Q8WWI5 657 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 SLC39A13Q96H72 371 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 SMG9Q9H0W8 520 aaKnown RBP15.19■□□□□ 0.02
BRAT1-201ENST00000340611 KCNK4Q9NYG8 393 aa15.19■□□□□ 0.02
BRAT1-201ENST00000340611 FBXO9Q9UK97 447 aaPredicted RBP15.19■□□□□ 0.02
BRAT1-201ENST00000340611 E7ESA3 106 aa15.18■□□□□ 0.02
BRAT1-201ENST00000340611 PEX1O43933 1283 aa15.18■□□□□ 0.02
BRAT1-201ENST00000340611 UGT1A9O60656 530 aa15.18■□□□□ 0.02
BRAT1-201ENST00000340611 ZBTB11O95625 1053 aaPredicted RBP15.18■□□□□ 0.02
BRAT1-201ENST00000340611 C8AP07357 584 aa15.18■□□□□ 0.02
BRAT1-201ENST00000340611 ZXDBP98169 803 aa15.18■□□□□ 0.02
BRAT1-201ENST00000340611 IGSF8Q969P0 613 aa15.18■□□□□ 0.02
BRAT1-201ENST00000340611 E2F7Q96AV8 911 aa15.18■□□□□ 0.02
BRAT1-201ENST00000340611 OSBPL6Q9BZF3 934 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms