RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 ARHGEF7Q14155 803 aa19.29■□□□□ 0.68
SYNE4-202ENST00000340477 FGL2Q14314 439 aa19.29■□□□□ 0.68
SYNE4-202ENST00000340477 PSAPL1Q6NUJ1 521 aa19.29■□□□□ 0.68
SYNE4-202ENST00000340477 ABI3BPQ7Z7G0 1075 aa19.29■□□□□ 0.68
SYNE4-202ENST00000340477 DEFB124Q8NES8 71 aa19.29■□□□□ 0.68
SYNE4-202ENST00000340477 OR13H1Q8NG92 308 aa19.29■□□□□ 0.68
SYNE4-202ENST00000340477 SAE1Q9UBE0 346 aaPredicted RBP19.29■□□□□ 0.68
SYNE4-202ENST00000340477 DNPEPQ9ULA0 475 aa19.29■□□□□ 0.68
SYNE4-202ENST00000340477 KNL1Q8NG31 2342 aa19.28■□□□□ 0.68
SYNE4-202ENST00000340477 A0A0U1RQJ8 604 aa19.28■□□□□ 0.68
SYNE4-202ENST00000340477 A0A1B0GTQ1 180 aa19.28■□□□□ 0.68
SYNE4-202ENST00000340477 KCNK3O14649 394 aa19.28■□□□□ 0.68
SYNE4-202ENST00000340477 TOR1BO14657 336 aa19.28■□□□□ 0.68
SYNE4-202ENST00000340477 ZNF189O75820 626 aaPredicted RBP19.28■□□□□ 0.68
SYNE4-202ENST00000340477 KCNK5O95279 499 aa19.28■□□□□ 0.68
SYNE4-202ENST00000340477 CEACAM1P13688 526 aa19.28■□□□□ 0.68
SYNE4-202ENST00000340477 CD59P13987 128 aa19.28■□□□□ 0.68
SYNE4-202ENST00000340477 VIPR1P32241 457 aa19.28■□□□□ 0.68
SYNE4-202ENST00000340477 TNNT3P45378 269 aaPredicted RBP19.28■□□□□ 0.68
SYNE4-202ENST00000340477 PEX5P50542 639 aa19.28■□□□□ 0.68
SYNE4-202ENST00000340477 THOP1P52888 689 aa19.28■□□□□ 0.68
SYNE4-202ENST00000340477 LRRC14Q15048 493 aa19.28■□□□□ 0.68
SYNE4-202ENST00000340477 PRKD1Q15139 912 aaPredicted RBP19.28■□□□□ 0.68
SYNE4-202ENST00000340477 Q6ZSR6 202 aa19.28■□□□□ 0.68
SYNE4-202ENST00000340477 ZC3H18Q86VM9 953 aaKnown RBP19.28■□□□□ 0.68
SYNE4-202ENST00000340477 AGAP3Q96P47 875 aa19.28■□□□□ 0.68
SYNE4-202ENST00000340477 QKIQ96PU8 341 aaKnown RBP eCLIP19.28■□□□□ 0.68
SYNE4-202ENST00000340477 TDRD1Q9BXT4 1180 aaKnown RBP19.28■□□□□ 0.68
SYNE4-202ENST00000340477 LZTFL1Q9NQ48 299 aa19.28■□□□□ 0.68
SYNE4-202ENST00000340477 KCTD5Q9NXV2 234 aa19.28■□□□□ 0.68
SYNE4-202ENST00000340477 B4GALT6Q9UBX8 382 aa19.28■□□□□ 0.68
SYNE4-202ENST00000340477 CAPN6Q9Y6Q1 641 aa19.28■□□□□ 0.68
SYNE4-202ENST00000340477 H7C0C1 242 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 RAD51BO15315 384 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 PCDHGA12O60330 932 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 STK10O94804 968 aaKnown RBP19.27■□□□□ 0.68
SYNE4-202ENST00000340477 ITGAVP06756 1048 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 CD86P42081 329 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 GRK6P43250 576 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 ATP5OP48047 213 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 RPL26P61254 145 aaKnown RBP19.27■□□□□ 0.68
SYNE4-202ENST00000340477 CCZ1BP86790 482 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 CCZ1P86791 482 aaPredicted RBP19.27■□□□□ 0.68
SYNE4-202ENST00000340477 IL9RQ01113 521 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 SEMG2Q02383 582 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 XRCC4Q13426 336 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 PTK2BQ14289 1009 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 ACOX1Q15067 660 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 TEX44Q53QW1 395 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 PIP4P1Q86T03 277 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 CDKL3Q8IVW4 592 aaPredicted RBP19.27■□□□□ 0.68
SYNE4-202ENST00000340477 ALG3Q92685 438 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 VAT1Q99536 393 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 KLF6Q99612 283 aaPredicted RBP19.27■□□□□ 0.68
SYNE4-202ENST00000340477 ADGRE3Q9BY15 652 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 CEP41Q9BYV8 373 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 PCDH9Q9HC56 1237 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 KLHL8Q9P2G9 620 aaPredicted RBP19.27■□□□□ 0.68
SYNE4-202ENST00000340477 PACSIN2Q9UNF0 486 aaPredicted RBP19.27■□□□□ 0.68
SYNE4-202ENST00000340477 RPL26L1Q9UNX3 145 aaKnown RBP19.27■□□□□ 0.68
SYNE4-202ENST00000340477 COQ6Q9Y2Z9 468 aa19.27■□□□□ 0.68
SYNE4-202ENST00000340477 CNOT1A5YKK6 2376 aaKnown RBP19.26■□□□□ 0.67
SYNE4-202ENST00000340477 POM121BA6NF01 834 aa19.26■□□□□ 0.67
SYNE4-202ENST00000340477 PTPN3P26045 913 aa19.26■□□□□ 0.67
SYNE4-202ENST00000340477 YPEL5P62699 121 aa19.26■□□□□ 0.67
SYNE4-202ENST00000340477 FOXK2Q01167 660 aa19.26■□□□□ 0.67
SYNE4-202ENST00000340477 ADCY2Q08462 1091 aa19.26■□□□□ 0.67
SYNE4-202ENST00000340477 RALGDSQ12967 914 aa19.26■□□□□ 0.67
SYNE4-202ENST00000340477 PDE1CQ14123 709 aaPredicted RBP19.26■□□□□ 0.67
SYNE4-202ENST00000340477 NOMO1Q15155 1222 aa19.26■□□□□ 0.67
SYNE4-202ENST00000340477 IRF4Q15306 451 aa19.26■□□□□ 0.67
SYNE4-202ENST00000340477 SEL1L2Q5TEA6 688 aa19.26■□□□□ 0.67
SYNE4-202ENST00000340477 LIPIQ6XZB0 460 aa19.26■□□□□ 0.67
SYNE4-202ENST00000340477 ZNF662Q6ZS27 426 aa19.26■□□□□ 0.67
SYNE4-202ENST00000340477 SPATS2Q86XZ4 545 aaKnown RBP19.26■□□□□ 0.67
SYNE4-202ENST00000340477 TTC13Q8NBP0 860 aa19.26■□□□□ 0.67
SYNE4-202ENST00000340477 LPCAT1Q8NF37 534 aa19.26■□□□□ 0.67
SYNE4-202ENST00000340477 ARRDC2Q8TBH0 407 aa19.26■□□□□ 0.67
SYNE4-202ENST00000340477 HTR3CQ8WXA8 447 aa19.26■□□□□ 0.67
SYNE4-202ENST00000340477 CENPTQ96BT3 561 aa19.26■□□□□ 0.67
SYNE4-202ENST00000340477 SCRN2Q96FV2 425 aa19.26■□□□□ 0.67
SYNE4-202ENST00000340477 NSMCE3Q96MG7 304 aa19.26■□□□□ 0.67
SYNE4-202ENST00000340477 SLC25A51Q9H1U9 297 aa19.26■□□□□ 0.67
SYNE4-202ENST00000340477 A8MX80 341 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 H3BM21 787 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 PSMD11O00231 422 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 SH3BP5O60239 455 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 PYGMP11217 842 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 CTPS1P17812 591 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 EPHA8P29322 1005 aaPredicted RBP19.25■□□□□ 0.67
SYNE4-202ENST00000340477 IGFALSP35858 605 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 RXRGP48443 463 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 OTUD4Q01804 1114 aaKnown RBP19.25■□□□□ 0.67
SYNE4-202ENST00000340477 NIPAL4Q0D2K0 466 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 ZNF211Q13398 564 aaPredicted RBP19.25■□□□□ 0.67
SYNE4-202ENST00000340477 AGERQ15109 404 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 SLC14A2Q15849 920 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 HS1BP3Q53T59 392 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 PRAMEF14Q5SWL7 426 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 DENND2CQ68D51 928 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms