RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 FAF1Q9UNN5 650 aaPredicted RBP12.02□□□□□ -0.49
CCDC144CP-201ENST00000340196 NME4O00746 187 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 GPC4O75487 556 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 C8BP07358 591 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 BDNFP23560 247 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 CCR3P51677 355 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 SLC5A3P53794 718 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 TXNL4AP83876 142 aaKnown RBP12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 NHSL2Q5HYW2 709 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 TMEM207Q6UWW9 146 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 BNIPLQ7Z465 357 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 TTC39CQ8N584 583 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 TTC16Q8NEE8 873 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 NUDT8Q8WV74 236 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 C12orf43Q96C57 262 aaKnown RBP12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 PAAF1Q9BRP4 392 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 KIFC1Q9BW19 673 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 SPAG4Q9NPE6 437 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 NMRK2Q9NPI5 230 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 RRN3Q9NYV6 651 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 PLK2Q9NYY3 685 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 A0A1W2PPW3 197 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 TMEM247A6NEH6 219 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 H2AFYO75367 372 aaKnown RBP12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 SUPT7LO94864 414 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 CPB1P15086 417 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 TAF6P49848 677 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 DAOAP59103 153 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 ECT2LQ008S8 904 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 PLCL1Q15111 1095 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 FAM83EQ2M2I3 478 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 PKN3Q6P5Z2 889 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 SETD3Q86TU7 594 aaPredicted RBP12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 OR52K2Q8NGK3 314 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 CYGBQ8WWM9 190 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 PCED1BQ96HM7 432 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 NSUN5Q96P11 429 aaKnown RBP12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 SLC2A13Q96QE2 648 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 PARK7Q99497 189 aaKnown RBP12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 TBL1YQ9BQ87 522 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 ADAMTS10Q9H324 1103 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 WDCPQ9H6R7 721 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 PFDN4Q9NQP4 134 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 SUCOQ9UBS9 1254 aaKnown RBP12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 VTI1BQ9UEU0 232 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 FBXW11Q9UKB1 542 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 BTRCQ9Y297 605 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 KCTD3Q9Y597 815 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 MOCS2O96007 188 aaPredicted RBP12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 CAPNS1P04632 268 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 ALDH3B2P48448 385 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 GALNT2Q10471 571 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 GRB7Q14451 532 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 FAM110CQ1W6H9 321 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 KIF19Q2TAC6 998 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 GPR158Q5T848 1215 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 ALKAL1Q6UXT8 129 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 TAC4Q86UU9 113 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 DDI1Q8WTU0 396 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 DNAJB3Q8WWF6 145 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 ISOC1Q96CN7 298 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 HDAC11Q96DB2 347 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 MPP6Q9NZW5 540 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 FBXO5Q9UKT4 447 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 UBQLN1Q9UMX0 589 aaKnown RBP12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 CRYL1Q9Y2S2 319 aa12.01□□□□□ -0.49
CCDC144CP-201ENST00000340196 TTC3P53804 2025 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 TCRBV3S1A0A5B6 114 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 HLA-DQB2P05538 268 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 SNRPB2P08579 225 aaKnown RBP12□□□□□ -0.49
CCDC144CP-201ENST00000340196 NAT1P18440 290 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 NPY2RP49146 381 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 CDK9P50750 372 aaKnown RBP12□□□□□ -0.49
CCDC144CP-201ENST00000340196 CLCN2P51788 898 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 SLC12A2P55011 1212 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 GSTM4Q03013 218 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 RFTN1Q14699 578 aaPredicted RBP12□□□□□ -0.49
CCDC144CP-201ENST00000340196 HERC3Q15034 1050 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 GEN1Q17RS7 908 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 FGD3Q5JSP0 725 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 TBCELQ5QJ74 424 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 GPR107Q5VW38 600 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 NAPEPLDQ6IQ20 393 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 TMEM26Q6ZUK4 368 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 DHFR2Q86XF0 187 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 DCBLD1Q8N8Z6 715 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 HASPINQ8TF76 798 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 HNRNPABQ99729 332 aaKnown RBP12□□□□□ -0.49
CCDC144CP-201ENST00000340196 OSBPL11Q9BXB4 747 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 LTB4R2Q9NPC1 389 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 CD300AQ9UGN4 299 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 OAZ3Q9UMX2 235 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 ZNF236Q9UL36 1845 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 NRP2O60462 931 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 KPNA6O60684 536 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 GPR32O75388 356 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 SRP72O76094 671 aaKnown RBP12□□□□□ -0.49
CCDC144CP-201ENST00000340196 APOA4P06727 396 aa12□□□□□ -0.49
CCDC144CP-201ENST00000340196 HSPA1AP0DMV8 641 aaKnown RBP12□□□□□ -0.49
CCDC144CP-201ENST00000340196 HSPA1BP0DMV9 641 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms