RNA–Protein interactions for RNA: ENST00000339711.8

PRDM8-201, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM8, Length 4,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-201ENST00000339711 ITGALP20701 1170 aa16.56■□□□□ 0.24
PRDM8-201ENST00000339711 GRIA4P48058 902 aa16.56■□□□□ 0.24
PRDM8-201ENST00000339711 USP46P62068 366 aa16.56■□□□□ 0.24
PRDM8-201ENST00000339711 POU4F1Q01851 419 aa16.56■□□□□ 0.24
PRDM8-201ENST00000339711 BNIP1Q12981 228 aa16.56■□□□□ 0.24
PRDM8-201ENST00000339711 LINGO4Q6UY18 593 aa16.56■□□□□ 0.24
PRDM8-201ENST00000339711 CLNKQ7Z7G1 428 aa16.56■□□□□ 0.24
PRDM8-201ENST00000339711 LDB1Q86U70 411 aaPredicted RBP16.56■□□□□ 0.24
PRDM8-201ENST00000339711 SLC22A9Q8IVM8 553 aa16.56■□□□□ 0.24
PRDM8-201ENST00000339711 TBATAQ96M53 351 aa16.56■□□□□ 0.24
PRDM8-201ENST00000339711 TSGA13Q96PP4 275 aa16.56■□□□□ 0.24
PRDM8-201ENST00000339711 POMKQ9H5K3 350 aa16.56■□□□□ 0.24
PRDM8-201ENST00000339711 ASAH2Q9NR71 780 aa16.56■□□□□ 0.24
PRDM8-201ENST00000339711 PCDHB9Q9Y5E1 797 aa16.56■□□□□ 0.24
PRDM8-201ENST00000339711 TRAV19A0A0A6YYK7 116 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 EFCAB14O75071 495 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 INPP5AQ14642 412 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 GALNTL6Q49A17 601 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 CYP4V2Q6ZWL3 525 aaPredicted RBP16.55■□□□□ 0.24
PRDM8-201ENST00000339711 ARL14EPQ8N8R7 260 aaPredicted RBP16.55■□□□□ 0.24
PRDM8-201ENST00000339711 MLPHQ9BV36 600 aaPredicted RBP16.55■□□□□ 0.24
PRDM8-201ENST00000339711 TRIM54Q9BYV2 358 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 ALG9Q9H6U8 611 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 ZNF358Q9NW07 568 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 TTC24A2A3L6 582 aaPredicted RBP16.55■□□□□ 0.24
PRDM8-201ENST00000339711 HOXB8P17481 243 aaPredicted RBP16.55■□□□□ 0.24
PRDM8-201ENST00000339711 ACVRL1P37023 503 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 UGT3A1Q6NUS8 523 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 ZNF598Q86UK7 904 aaKnown RBP16.55■□□□□ 0.24
PRDM8-201ENST00000339711 ZNF461Q8TAF7 563 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 C7orf26Q96N11 449 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 PNPOQ9NVS9 261 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 YIPF1Q9Y548 306 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 PRR5-ARHGAP8B1AHC4 643 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 NDST3O95803 873 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 ARHGAP8P85298 464 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 STX5Q13190 355 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 CNKSR3Q6P9H4 555 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 BEND5Q7L4P6 421 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 NECAB2Q7Z6G3 386 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 DNAJB7Q7Z6W7 309 aaPredicted RBP16.55■□□□□ 0.24
PRDM8-201ENST00000339711 GDPD5Q8WTR4 605 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 FAR2Q96K12 515 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 CIPCQ9C0C6 399 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 SEMA6AQ9H2E6 1030 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.55■□□□□ 0.24
PRDM8-201ENST00000339711 PDP2Q9P2J9 529 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 RBBP6Q7Z6E9 1792 aaKnown RBP16.55■□□□□ 0.24
PRDM8-201ENST00000339711 A8MX80 341 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 NR5A2O00482 541 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 CLPTM1O96005 669 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 TFEBP19484 476 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 FAM26DQ5JW98 314 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 TSTD2Q5T7W7 516 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 TPGS2Q68CL5 300 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 C6orf89Q6UWU4 347 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 SETD3Q86TU7 594 aaPredicted RBP16.55■□□□□ 0.24
PRDM8-201ENST00000339711 KYQ8NBH2 561 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 CATSPER1Q8NEC5 780 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 C1orf74Q96LT6 269 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 BPIFA1Q9NP55 256 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 FNIP2Q9P278 1114 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 SLC25A13Q9UJS0 675 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 PHF24Q9UPV7 400 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 USP3Q9Y6I4 520 aa16.55■□□□□ 0.24
PRDM8-201ENST00000339711 SAC3D1A6NKF1 404 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 TGDSO95455 350 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 FGFR3P22607 806 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 ATP5F1P24539 256 aaPredicted RBP16.54■□□□□ 0.24
PRDM8-201ENST00000339711 MAP4P27816 1152 aaKnown RBP16.54■□□□□ 0.24
PRDM8-201ENST00000339711 RPL14P50914 215 aaKnown RBP16.54■□□□□ 0.24
PRDM8-201ENST00000339711 TTC30BQ8N4P2 665 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 VPS50Q96JG6 964 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 ZNF184Q99676 751 aaPredicted RBP16.54■□□□□ 0.24
PRDM8-201ENST00000339711 ATP6AP2A0A1C7CYW4 349 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 CD3EAPO15446 510 aaKnown RBP16.54■□□□□ 0.24
PRDM8-201ENST00000339711 ATP6AP2O75787 350 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 BAIAP3O94812 1187 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 TRIM16O95361 564 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 PGM3O95394 542 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 TOP3BO95985 862 aaKnown RBP16.54■□□□□ 0.24
PRDM8-201ENST00000339711 CTNNB1P35222 781 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 CREMQ03060 361 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 TTC7BQ86TV6 843 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 DENND1AQ8TEH3 1009 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 NT5C3BQ969T7 300 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 IGSF21Q96ID5 467 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 MRPL57Q9BQC6 102 aaKnown RBP16.54■□□□□ 0.24
PRDM8-201ENST00000339711 KLHL4Q9C0H6 718 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 COPS7BQ9H9Q2 264 aaPredicted RBP16.54■□□□□ 0.24
PRDM8-201ENST00000339711 MOCS1Q9NZB8 636 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 PCDHGC4Q9Y5F7 938 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 RFPL1O75677 317 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 NRF1Q16656 503 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 THEMIS2Q5TEJ8 643 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 LIPMQ5VYY2 423 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 TTC33Q6PID6 262 aaPredicted RBP16.54■□□□□ 0.24
PRDM8-201ENST00000339711 OR52K2Q8NGK3 314 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 OR4L1Q8NH43 312 aa16.54■□□□□ 0.24
PRDM8-201ENST00000339711 RTP3Q9BQQ7 232 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms