RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 CTSOP43234 321 aaPredicted RBP22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 ACVR1Q04771 509 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 SEMA3AQ14563 771 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 SLC14A2Q15849 920 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 CCDC153Q494R4 210 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 TAF1BQ53T94 588 aaPredicted RBP22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 KIAA0408Q6ZU52 694 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 C10orf67Q8IYJ2 551 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 CENPLQ8N0S6 344 aaPredicted RBP22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 OR4K2Q8NGD2 314 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 FIBINQ8TAL6 211 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 OLFM1Q99784 485 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 KCNK13Q9HB14 408 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 KIAA1522Q9P206 1035 aaPredicted RBP22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 ACOT9Q9Y305 439 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 PCDHB9Q9Y5E1 797 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 CEP290O15078 2479 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 TK2O00142 265 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 RPP40O75818 363 aaKnown RBP22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 CES1P23141 567 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 SCTRP47872 440 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 NSUN2Q08J23 767 aaKnown RBP eCLIP22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 SLC12A1Q13621 1099 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 ITGA9Q13797 1035 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 PLEKHG6Q3KR16 790 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 LACTB2Q53H82 288 aaPredicted RBP22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 ARHGAP15Q53QZ3 475 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 MPP7Q5T2T1 576 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 ARMC3Q5W041 872 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 RETSATQ6NUM9 610 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 ATG14Q6ZNE5 492 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 ADGRD2Q7Z7M1 963 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 CNPY4Q8N129 248 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 PLCD4Q9BRC7 762 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 TNKS2Q9H2K2 1166 aa22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 FNDC3AQ9Y2H6 1198 aaKnown RBP22.51■■□□□ 1.19
PDLIM2-203ENST00000339162 ANKRD36A6QL64 1941 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 G3V2L1 256 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 SNNO75324 88 aaPredicted RBP22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 GLP2RO95838 553 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 S1PR4O95977 384 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 CYBBP04839 570 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 DLDP09622 509 aaKnown RBP22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 HLA-FP30511 346 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 STK19P49842 368 aaPredicted RBP22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 DLG1Q12959 904 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 CAMK1DQ8IU85 385 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 ARID3BQ8IVW6 561 aaPredicted RBP22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 STYXQ8WUJ0 223 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 MOCOSQ96EN8 888 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 CDKN2AIPNLQ96HQ2 116 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 ACSS2Q9NR19 701 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 EVLQ9UI08 416 aaPredicted RBP22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 MTF2Q9Y483 593 aaPredicted RBP22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 NUMBLQ9Y6R0 609 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 NOTCH4Q99466 2003 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 NEDD8-MDP1E9PL57 170 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 CD3EAPO15446 510 aaKnown RBP22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 CRTAMO95727 393 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 SLC12A2P55011 1212 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 C12orf76Q8N812 135 aaPredicted RBP22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 NXNL1Q96CM4 212 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 SCYL1Q96KG9 808 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 C7orf26Q96N11 449 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 ADGRE3Q9BY15 652 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 MYLK2Q9H1R3 596 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 BPIFA1Q9NP55 256 aa22.5■■□□□ 1.19
PDLIM2-203ENST00000339162 ZNF140P52738 457 aaPredicted RBP22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 GPM6BQ13491 265 aa22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 ASTLQ6HA08 431 aaPredicted RBP22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 OR4L1Q8NH43 312 aa22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 ACDQ96AP0 544 aa22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 ERP27Q96DN0 273 aa22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 TRANK1O15050 2925 aa22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 XYLBO75191 536 aa22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 PIGNO95427 931 aa22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 RALBP11234 206 aa22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 CTPS1P17812 591 aa22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 PFKLP17858 780 aa22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 ARRB2P32121 409 aa22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 PRSS36Q5K4E3 855 aa22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 TMEM151AQ8N4L1 468 aa22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 GABPB2Q8TAK5 448 aaPredicted RBP22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 RAB3IL1Q8TBN0 382 aa22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 LRRC37BQ96QE4 947 aa22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 TMEM120AQ9BXJ8 343 aa22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 THAP1Q9NVV9 213 aa22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 NLE1Q9NVX2 485 aaPredicted RBP22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 ANKRD6Q9Y2G4 727 aa22.49■■□□□ 1.19
PDLIM2-203ENST00000339162 BNIP3LO60238 219 aa22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 TGDSO95455 350 aa22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 IL1BP01584 269 aa22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 RB1P06400 928 aa22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 SBK3P0C264 359 aa22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 MYL2P10916 166 aa22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 CEBPBP17676 345 aa22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 SP100P23497 879 aaPredicted RBP22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 PBX2P40425 430 aa22.48■■□□□ 1.19
PDLIM2-203ENST00000339162 SLC1A6P48664 564 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms