RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 KCTD5Q9NXV2 234 aa14.31□□□□□ -0.12
COMMD4-202ENST00000338995 LHX3Q9UBR4 397 aa14.31□□□□□ -0.12
COMMD4-202ENST00000338995 PISDQ9UG56 409 aa14.31□□□□□ -0.12
COMMD4-202ENST00000338995 ACSL6Q9UKU0 697 aa14.31□□□□□ -0.12
COMMD4-202ENST00000338995 FZD10Q9ULW2 581 aa14.31□□□□□ -0.12
COMMD4-202ENST00000338995 UNC13CQ8NB66 2214 aa14.31□□□□□ -0.12
COMMD4-202ENST00000338995 TSPAN11A1L157 253 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 ITGB2P05107 769 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 CELA2BP08218 269 aaPredicted RBP14.3□□□□□ -0.12
COMMD4-202ENST00000338995 LIPCP11150 499 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 JAM2P57087 298 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 BCL2L1Q07817 233 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 PTP4A2Q12974 167 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 PEX6Q13608 980 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 TCEA2Q15560 299 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 MANEAQ5SRI9 462 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 B3GNT8Q7Z7M8 397 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 SRLQ86TD4 932 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 CAMK1DQ8IU85 385 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 NETO2Q8NC67 525 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 GPR156Q8NFN8 814 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 KIAA1524Q8TCG1 905 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 VOPP1Q96AW1 172 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 EXOC2Q96KP1 924 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 PCDHB18PQ96TA0 734 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 KLC2Q9H0B6 622 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 DPEP2Q9H4A9 486 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 LRIT1Q9P2V4 623 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 MOSPD1Q9UJG1 213 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 NEU3Q9UQ49 428 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 LOXL2Q9Y4K0 774 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 CHD5Q8TDI0 1954 aa14.3□□□□□ -0.12
COMMD4-202ENST00000338995 A0A1W2PQ67 120 aa14.29□□□□□ -0.12
COMMD4-202ENST00000338995 A0A1W2PQM1 296 aa14.29□□□□□ -0.12
COMMD4-202ENST00000338995 CCP110O43303 1012 aa14.29□□□□□ -0.12
COMMD4-202ENST00000338995 PRAMEF11O60813 436 aa14.29□□□□□ -0.12
COMMD4-202ENST00000338995 RECQL5O94762 991 aaPredicted RBP14.29□□□□□ -0.12
COMMD4-202ENST00000338995 WISP1O95388 367 aa14.29□□□□□ -0.12
COMMD4-202ENST00000338995 ELFN1P0C7U0 828 aa14.29□□□□□ -0.12
COMMD4-202ENST00000338995 CD82P27701 267 aa14.29□□□□□ -0.12
COMMD4-202ENST00000338995 RENBPP51606 427 aa14.29□□□□□ -0.12
COMMD4-202ENST00000338995 PDX1P52945 283 aa14.29□□□□□ -0.12
COMMD4-202ENST00000338995 KIAA1024LP59773 190 aa14.29□□□□□ -0.12
COMMD4-202ENST00000338995 ZFP36L1Q07352 338 aaKnown RBP14.29□□□□□ -0.12
COMMD4-202ENST00000338995 NSUN2Q08J23 767 aaKnown RBP eCLIP14.29□□□□□ -0.12
COMMD4-202ENST00000338995 BIRC2Q13490 618 aa14.29□□□□□ -0.12
COMMD4-202ENST00000338995 RFTN1Q14699 578 aaPredicted RBP14.29□□□□□ -0.12
COMMD4-202ENST00000338995 C14orf28Q4W4Y0 310 aa14.29□□□□□ -0.12
COMMD4-202ENST00000338995 PRICKLE2Q7Z3G6 844 aa14.29□□□□□ -0.12
COMMD4-202ENST00000338995 AGPAT1Q99943 283 aa14.29□□□□□ -0.12
COMMD4-202ENST00000338995 CINPQ9BW66 212 aaPredicted RBP14.29□□□□□ -0.12
COMMD4-202ENST00000338995 B3GNT4Q9C0J1 378 aa14.29□□□□□ -0.12
COMMD4-202ENST00000338995 CHMP5Q9NZZ3 219 aa14.29□□□□□ -0.12
COMMD4-202ENST00000338995 RABGEF1Q9UJ41 708 aa14.29□□□□□ -0.12
COMMD4-202ENST00000338995 PMS2P1A4D2B8 440 aa14.28□□□□□ -0.12
COMMD4-202ENST00000338995 J3KR12 359 aa14.28□□□□□ -0.12
COMMD4-202ENST00000338995 EEF2KO00418 725 aaKnown RBP14.28□□□□□ -0.12
COMMD4-202ENST00000338995 EFSO43281 561 aa14.28□□□□□ -0.12
COMMD4-202ENST00000338995 NUDT21O43809 227 aaKnown RBP14.28□□□□□ -0.12
COMMD4-202ENST00000338995 BUB1BO60566 1050 aaPredicted RBP14.28□□□□□ -0.12
COMMD4-202ENST00000338995 MMP12P39900 470 aa14.28□□□□□ -0.12
COMMD4-202ENST00000338995 PAPOLAP51003 745 aaKnown RBP14.28□□□□□ -0.12
COMMD4-202ENST00000338995 NFATC3Q12968 1075 aa14.28□□□□□ -0.12
COMMD4-202ENST00000338995 KRT31Q15323 416 aa14.28□□□□□ -0.12
COMMD4-202ENST00000338995 CLPPQ16740 277 aaPredicted RBP14.28□□□□□ -0.12
COMMD4-202ENST00000338995 CERCAMQ5T4B2 595 aa14.28□□□□□ -0.12
COMMD4-202ENST00000338995 PHF19Q5T6S3 580 aa14.28□□□□□ -0.12
COMMD4-202ENST00000338995 PIM3Q86V86 326 aa14.28□□□□□ -0.12
COMMD4-202ENST00000338995 MCEEQ96PE7 176 aa14.28□□□□□ -0.12
COMMD4-202ENST00000338995 LRRC19Q9H756 370 aa14.28□□□□□ -0.12
COMMD4-202ENST00000338995 SP110Q9HB58 689 aa14.28□□□□□ -0.12
COMMD4-202ENST00000338995 CYP4F12Q9HCS2 524 aa14.28□□□□□ -0.12
COMMD4-202ENST00000338995 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.27□□□□□ -0.13
COMMD4-202ENST00000338995 A0A1W2PQC6 194 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 RHPN2P1A8MT19 583 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 RNF8O76064 485 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 HGFP14210 728 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 CDK11BP21127 795 aaKnown RBP14.27□□□□□ -0.13
COMMD4-202ENST00000338995 TNFAIP3P21580 790 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 TRIM23P36406 574 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 KLK7P49862 253 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 ZNF135P52742 658 aaPredicted RBP14.27□□□□□ -0.13
COMMD4-202ENST00000338995 ACOX1Q15067 660 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 TMCO4Q5TGY1 634 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 AFMIDQ63HM1 303 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 ACAD10Q6JQN1 1059 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 PNCKQ6P2M8 343 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 LIPIQ6XZB0 460 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 MON1BQ7L1V2 547 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 OR1E3Q8WZA6 343 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 USP7Q93009 1102 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 FUBP1Q96AE4 644 aaKnown RBP14.27□□□□□ -0.13
COMMD4-202ENST00000338995 GSDMCQ9BYG8 508 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 SLC39A8Q9C0K1 460 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 DHX35Q9H5Z1 703 aaKnown RBP14.27□□□□□ -0.13
COMMD4-202ENST00000338995 WDR26Q9H7D7 661 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 PDFQ9HBH1 243 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 PHPT1Q9NRX4 125 aaPredicted RBP14.27□□□□□ -0.13
COMMD4-202ENST00000338995 PARVAQ9NVD7 372 aa14.27□□□□□ -0.13
COMMD4-202ENST00000338995 RNF215Q9Y6U7 377 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms