RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SLC29A1Q99808 456 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 IDI2Q9BXS1 227 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 SFMBT1Q9UHJ3 866 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 ZDHHC2Q9UIJ5 367 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 SYNPO2Q9UMS6 1093 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 KRBA1A5PL33 1030 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 BTN3A3O00478 584 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 HMBSP08397 361 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 SLC26A3P40879 764 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 RPL26P61254 145 aaKnown RBP13.3□□□□□ -0.28
COL2A1-201ENST00000337299 SLC6A3Q01959 620 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 EFCAB12Q6NXP0 572 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 C12orf56Q8IXR9 622 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 METTL6Q8TCB7 284 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 CHCHD6Q9BRQ6 235 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 ADAM28Q9UKQ2 775 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 DUSP12Q9UNI6 340 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 INVSQ9Y283 1065 aa13.3□□□□□ -0.28
COL2A1-201ENST00000337299 KIF13AQ9H1H9 1805 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 H3BMM5 538 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 BMP10O95393 424 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 ASS1P00966 412 aaKnown RBP13.29□□□□□ -0.28
COL2A1-201ENST00000337299 ILF2Q12905 390 aaKnown RBP13.29□□□□□ -0.28
COL2A1-201ENST00000337299 PMS2P3Q13401 168 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 SNAPC2Q13487 334 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 TMEM236Q5W0B7 351 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 C16orf62Q7Z3J2 963 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 SLC44A2Q8IWA5 706 aaPredicted RBP13.29□□□□□ -0.28
COL2A1-201ENST00000337299 METTL25Q8N6Q8 603 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 APPL2Q8NEU8 664 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 ZMYM5Q9UJ78 669 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 ILVBLA1L0T0 632 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 MAGEB16A2A368 324 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 C19orf81C9J6K1 198 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 TP73O15350 636 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 CPSF4O95639 269 aaKnown RBP13.29□□□□□ -0.28
COL2A1-201ENST00000337299 SRP54P61011 504 aaKnown RBP13.29□□□□□ -0.28
COL2A1-201ENST00000337299 OLIG2Q13516 323 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 RAP1GAP2Q684P5 730 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 ANKS6Q68DC2 871 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 MPZL3Q6UWV2 235 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 PIWIL3Q7Z3Z3 882 aaKnown RBP13.29□□□□□ -0.28
COL2A1-201ENST00000337299 FAM35AQ86V20 835 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 ARMC8Q8IUR7 673 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 TTC30BQ8N4P2 665 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 BORCS6Q96GS4 357 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 TBATAQ96M53 351 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 HDHD2Q9H0R4 259 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 AAR2Q9Y312 384 aaKnown RBP13.29□□□□□ -0.28
COL2A1-201ENST00000337299 MFHAS1Q9Y4C4 1052 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 TIMM22Q9Y584 194 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.29□□□□□ -0.28
COL2A1-201ENST00000337299 IL18RAPO95256 599 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 MRPS5P82675 430 aaKnown RBP13.29□□□□□ -0.28
COL2A1-201ENST00000337299 TOP3AQ13472 1001 aaPredicted RBP13.29□□□□□ -0.28
COL2A1-201ENST00000337299 TTLL4Q14679 1199 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 TNFAIP8L3Q5GJ75 292 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 TYW3Q6IPR3 259 aaKnown RBP13.29□□□□□ -0.28
COL2A1-201ENST00000337299 HDDC2Q7Z4H3 204 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 TRAPPC12Q8WVT3 735 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 TEKT5Q96M29 485 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 BIRC8Q96P09 236 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 SENP6Q9GZR1 1112 aaPredicted RBP13.29□□□□□ -0.28
COL2A1-201ENST00000337299 ABCG8Q9H221 673 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 MOV10Q9HCE1 1003 aaKnown RBP13.29□□□□□ -0.28
COL2A1-201ENST00000337299 PCDHGB4Q9UN71 923 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 EIF3LQ9Y262 564 aaKnown RBP13.29□□□□□ -0.28
COL2A1-201ENST00000337299 PCDHGA3Q9Y5H0 932 aa13.29□□□□□ -0.28
COL2A1-201ENST00000337299 CCR1P32246 355 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 ABATP80404 500 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 MPP1Q00013 466 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 ADIGQ0VDE8 80 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 TWF2Q6IBS0 349 aaKnown RBP13.28□□□□□ -0.28
COL2A1-201ENST00000337299 GPR180Q86V85 440 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 TRIM69Q86WT6 500 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 PLD6Q8N2A8 252 aaKnown RBP13.28□□□□□ -0.28
COL2A1-201ENST00000337299 PAWRQ96IZ0 340 aaKnown RBP13.28□□□□□ -0.28
COL2A1-201ENST00000337299 XYLBO75191 536 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 PRKD3O94806 890 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 CPB1P15086 417 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 ITIH1P19827 911 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 LIMK2P53671 638 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 VBP1P61758 197 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 BTBD8Q5XKL5 378 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 PCDH19Q8TAB3 1148 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 KBTBD7Q8WVZ9 684 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 DPY30Q9C005 99 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 SP140LQ9H930 580 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 A0A1B0GTW7 788 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 A6NL46 340 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 CPNE3O75131 537 aaKnown RBP13.28□□□□□ -0.28
COL2A1-201ENST00000337299 YWHAQP27348 245 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 ATXN1P54253 815 aaKnown RBP13.28□□□□□ -0.28
COL2A1-201ENST00000337299 OR2B6P58173 313 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 PGM5Q15124 567 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 FAM45BPQ6NSW5 357 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 EPGNQ6UW88 154 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 STARD8Q92502 1023 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 LENG9Q96B70 501 aa13.28□□□□□ -0.28
COL2A1-201ENST00000337299 MRPL57Q9BQC6 102 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms