RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SLC6A17Q9H1V8 727 aa21.61■■□□□ 1.05
TPM1-204ENST00000334895 NINJ2Q9NZG7 142 aa21.61■■□□□ 1.05
TPM1-204ENST00000334895 A0A1W2PQ67 120 aa21.6■■□□□ 1.05
TPM1-204ENST00000334895 PLK4O00444 970 aa21.6■■□□□ 1.05
TPM1-204ENST00000334895 AURKAO14965 403 aa21.6■■□□□ 1.05
TPM1-204ENST00000334895 ERLIN1O75477 346 aa21.6■■□□□ 1.05
TPM1-204ENST00000334895 C7P10643 843 aa21.6■■□□□ 1.05
TPM1-204ENST00000334895 HNF1BP35680 557 aa21.6■■□□□ 1.05
TPM1-204ENST00000334895 CST6Q15828 149 aa21.6■■□□□ 1.05
TPM1-204ENST00000334895 CRY1Q16526 586 aa21.6■■□□□ 1.05
TPM1-204ENST00000334895 UGP2Q16851 508 aa21.6■■□□□ 1.05
TPM1-204ENST00000334895 CEP128Q6ZU80 1094 aa21.6■■□□□ 1.05
TPM1-204ENST00000334895 PAF1Q8N7H5 531 aa21.6■■□□□ 1.05
TPM1-204ENST00000334895 MDGA1Q8NFP4 955 aa21.6■■□□□ 1.05
TPM1-204ENST00000334895 STAMBPL1Q96FJ0 436 aa21.6■■□□□ 1.05
TPM1-204ENST00000334895 MCCC1Q96RQ3 725 aaPredicted RBP21.6■■□□□ 1.05
TPM1-204ENST00000334895 EPB41L4BQ9H329 900 aa21.6■■□□□ 1.05
TPM1-204ENST00000334895 CHRAC1Q9NRG0 131 aa21.6■■□□□ 1.05
TPM1-204ENST00000334895 TCAF1Q9Y4C2 921 aa21.6■■□□□ 1.05
TPM1-204ENST00000334895 MAD1L1Q9Y6D9 718 aa21.6■■□□□ 1.05
TPM1-204ENST00000334895 CAPN8A6NHC0 703 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 C1QTNF3-AMACRE9PGA6 284 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 LDB2O43679 373 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 ABL2P42684 1182 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 PMS2P54278 862 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 SEMG2Q02383 582 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 CDKN3Q16667 212 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 KYNUQ16719 465 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 PCID2Q5JVF3 399 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 ZNF776Q68DI1 518 aaPredicted RBP21.59■■□□□ 1.05
TPM1-204ENST00000334895 CASC4Q6P4E1 433 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 AADATQ8N5Z0 425 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 PYROXD1Q8WU10 500 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 ANKRD7Q92527 254 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 CLDN23Q96B33 292 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 SCRN2Q96FV2 425 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 ZNF778Q96MU6 729 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 RANBP9Q96S59 729 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 KIFC1Q9BW19 673 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 OSBPL6Q9BZF3 934 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 FBRSQ9HAH7 460 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 SOX13Q9UN79 622 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 ZDBF2Q9HCK1 2354 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 KMT2EQ8IZD2 1858 aa21.59■■□□□ 1.05
TPM1-204ENST00000334895 NPIPB15A6NHN6 443 aaPredicted RBP21.58■■□□□ 1.05
TPM1-204ENST00000334895 UPK3BL1B0FP48 263 aa21.58■■□□□ 1.05
TPM1-204ENST00000334895 UPK3BL2E5RIL1 263 aa21.58■■□□□ 1.05
TPM1-204ENST00000334895 MID1O15344 667 aa21.58■■□□□ 1.05
TPM1-204ENST00000334895 SPINT1O43278 529 aa21.58■■□□□ 1.05
TPM1-204ENST00000334895 DRD3P35462 400 aa21.58■■□□□ 1.05
TPM1-204ENST00000334895 GPX6P59796 221 aa21.58■■□□□ 1.05
TPM1-204ENST00000334895 UAP1Q16222 522 aaPredicted RBP21.58■■□□□ 1.05
TPM1-204ENST00000334895 CES3Q6UWW8 571 aa21.58■■□□□ 1.05
TPM1-204ENST00000334895 TMPRSS6Q8IU80 811 aa21.58■■□□□ 1.05
TPM1-204ENST00000334895 BRSK1Q8TDC3 778 aa21.58■■□□□ 1.05
TPM1-204ENST00000334895 LYSMD1Q96S90 227 aa21.58■■□□□ 1.05
TPM1-204ENST00000334895 MAGEE1Q9HCI5 957 aa21.58■■□□□ 1.05
TPM1-204ENST00000334895 LRRC4CQ9HCJ2 640 aa21.58■■□□□ 1.05
TPM1-204ENST00000334895 ZC3H7BQ9UGR2 993 aaKnown RBP21.58■■□□□ 1.05
TPM1-204ENST00000334895 KCTD3Q9Y597 815 aa21.58■■□□□ 1.05
TPM1-204ENST00000334895 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.58■■□□□ 1.05
TPM1-204ENST00000334895 RNASEH1O60930 286 aaKnown RBP21.58■■□□□ 1.04
TPM1-204ENST00000334895 ADRA1DP25100 572 aa21.58■■□□□ 1.04
TPM1-204ENST00000334895 POLR2LP62875 67 aaKnown RBP21.58■■□□□ 1.04
TPM1-204ENST00000334895 CNTN1Q12860 1018 aa21.58■■□□□ 1.04
TPM1-204ENST00000334895 SEPT6Q14141 434 aa21.58■■□□□ 1.04
TPM1-204ENST00000334895 FAM46CQ5VWP2 391 aa21.58■■□□□ 1.04
TPM1-204ENST00000334895 UNC5AQ6ZN44 842 aa21.58■■□□□ 1.04
TPM1-204ENST00000334895 SYT13Q7L8C5 426 aa21.58■■□□□ 1.04
TPM1-204ENST00000334895 TTC30BQ8N4P2 665 aa21.58■■□□□ 1.04
TPM1-204ENST00000334895 MREGQ8N565 214 aa21.58■■□□□ 1.04
TPM1-204ENST00000334895 FLCNQ8NFG4 579 aa21.58■■□□□ 1.04
TPM1-204ENST00000334895 EID2BQ96D98 161 aa21.58■■□□□ 1.04
TPM1-204ENST00000334895 CFAP36Q96G28 342 aa21.58■■□□□ 1.04
TPM1-204ENST00000334895 PPP1R16AQ96I34 528 aa21.58■■□□□ 1.04
TPM1-204ENST00000334895 MFSD1Q9H3U5 465 aa21.58■■□□□ 1.04
TPM1-204ENST00000334895 PCDH12Q9NPG4 1184 aa21.58■■□□□ 1.04
TPM1-204ENST00000334895 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.58■■□□□ 1.04
TPM1-204ENST00000334895 SERGEFQ9UGK8 458 aa21.58■■□□□ 1.04
TPM1-204ENST00000334895 ZNF711Q9Y462 761 aa21.58■■□□□ 1.04
TPM1-204ENST00000334895 ARL5AQ9Y689 179 aa21.58■■□□□ 1.04
TPM1-204ENST00000334895 CCDC78A2IDD5 438 aa21.57■■□□□ 1.04
TPM1-204ENST00000334895 MROH6A6NGR9 719 aa21.57■■□□□ 1.04
TPM1-204ENST00000334895 ADH1BP00325 375 aa21.57■■□□□ 1.04
TPM1-204ENST00000334895 PGAM1P18669 254 aa21.57■■□□□ 1.04
TPM1-204ENST00000334895 C5AR1P21730 350 aa21.57■■□□□ 1.04
TPM1-204ENST00000334895 LHCGRP22888 699 aa21.57■■□□□ 1.04
TPM1-204ENST00000334895 NMBRP28336 390 aa21.57■■□□□ 1.04
TPM1-204ENST00000334895 SSTR1P30872 391 aa21.57■■□□□ 1.04
TPM1-204ENST00000334895 USP45Q70EL2 814 aa21.57■■□□□ 1.04
TPM1-204ENST00000334895 TRMT10CQ7L0Y3 403 aaKnown RBP21.57■■□□□ 1.04
TPM1-204ENST00000334895 TTC7BQ86TV6 843 aa21.57■■□□□ 1.04
TPM1-204ENST00000334895 TMEM135Q86UB9 458 aa21.57■■□□□ 1.04
TPM1-204ENST00000334895 TSPAN33Q86UF1 283 aa21.57■■□□□ 1.04
TPM1-204ENST00000334895 PPHLN1Q8NEY8 458 aaKnown RBP21.57■■□□□ 1.04
TPM1-204ENST00000334895 MFSD3Q96ES6 412 aa21.57■■□□□ 1.04
TPM1-204ENST00000334895 MRGPRX1Q96LB2 322 aa21.57■■□□□ 1.04
TPM1-204ENST00000334895 FCRL3Q96P31 734 aaPredicted RBP21.57■■□□□ 1.04
TPM1-204ENST00000334895 HDAC8Q9BY41 377 aa21.57■■□□□ 1.04
TPM1-204ENST00000334895 CHRDQ9H2X0 955 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms