RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 RIOX2Q8IUF8 465 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 TERB1Q8NA31 727 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 HMGCLL1Q8TB92 370 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 HEXDCQ8WVB3 486 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 SEPT8Q92599 483 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 TRIM8Q9BZR9 551 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 LRRC4Q9HBW1 653 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 CCM2LQ9NUG4 571 aaPredicted RBP13.8□□□□□ -0.2
SYNE3-201ENST00000334258 TMEM181Q9P2C4 612 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 SBF1O95248 1867 aa13.8□□□□□ -0.2
SYNE3-201ENST00000334258 PPEF2O14830 753 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 NPHS1O60500 1241 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 ZNF286BP0CG31 522 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 EEF1DP29692 281 aaKnown RBP13.79□□□□□ -0.2
SYNE3-201ENST00000334258 PSMD8P48556 350 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 TAS2R39P59534 338 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 RPS6KA2Q15349 733 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 TSTD2Q5T7W7 516 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 EPHX4Q8IUS5 362 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 DDIASQ8IXT1 998 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 EXOC8Q8IYI6 725 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 SLC7A5P1Q8MH63 180 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 PELI3Q8N2H9 469 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 MAELQ96JY0 434 aaKnown RBP13.79□□□□□ -0.2
SYNE3-201ENST00000334258 FAR2Q96K12 515 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 RPL10LQ96L21 214 aaKnown RBP13.79□□□□□ -0.2
SYNE3-201ENST00000334258 NEURL2Q9BR09 285 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 ING2Q9H160 280 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 TBC1D13Q9NVG8 400 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 NSMCE4AQ9NXX6 385 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 MTF2Q9Y483 593 aaPredicted RBP13.79□□□□□ -0.2
SYNE3-201ENST00000334258 CORINQ9Y5Q5 1042 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 PHIPQ8WWQ0 1821 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 TRIP11Q15643 1979 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 DOCK1Q14185 1865 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 BAIAP3O94812 1187 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 DCKP27707 260 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 NFATC3Q12968 1075 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 OTUD3Q5T2D3 398 aaPredicted RBP13.79□□□□□ -0.2
SYNE3-201ENST00000334258 ZNF354CQ86Y25 554 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 MFSD2AQ8NA29 543 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 HDAC10Q969S8 669 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 CENPNQ96H22 339 aaPredicted RBP13.79□□□□□ -0.2
SYNE3-201ENST00000334258 LRCH3Q96II8 777 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 SNX27Q96L92 541 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 MRPL57Q9BQC6 102 aaKnown RBP13.79□□□□□ -0.2
SYNE3-201ENST00000334258 NDEL1Q9GZM8 345 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 CDHR5Q9HBB8 845 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 MRGBPQ9NV56 204 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 ARMC1Q9NVT9 282 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 RCOR3Q9P2K3 495 aaPredicted RBP13.79□□□□□ -0.2
SYNE3-201ENST00000334258 CPA4Q9UI42 421 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 TIMM22Q9Y584 194 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 ANGPT2O15123 496 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 KPNA2P52292 529 aaKnown RBP13.79□□□□□ -0.2
SYNE3-201ENST00000334258 BCAT1P54687 386 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 GJA9P57773 515 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 TPI1P60174 286 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 CDH17Q12864 832 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 FRG1Q14331 258 aaKnown RBP13.79□□□□□ -0.2
SYNE3-201ENST00000334258 SLC25A52Q3SY17 297 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 ZIK1Q3SY52 487 aaPredicted RBP13.79□□□□□ -0.2
SYNE3-201ENST00000334258 VPS26BQ4G0F5 336 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 PERM1Q5SV97 790 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 CMTR2Q8IYT2 770 aaKnown RBP13.79□□□□□ -0.2
SYNE3-201ENST00000334258 PACRGLQ8N7B6 248 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 CHST13Q8NET6 341 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 DNERQ8NFT8 737 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 HNRNPABQ99729 332 aaKnown RBP13.79□□□□□ -0.2
SYNE3-201ENST00000334258 C1orf50Q9BV19 199 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 MLPHQ9BV36 600 aaPredicted RBP13.79□□□□□ -0.2
SYNE3-201ENST00000334258 ADNPQ9H2P0 1102 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 TNFRSF12AQ9NP84 129 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 DAPK2Q9UIK4 370 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 WDR81Q562E7 1941 aa13.79□□□□□ -0.2
SYNE3-201ENST00000334258 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.78□□□□□ -0.2
SYNE3-201ENST00000334258 A0A1W2PQ67 120 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 DLGAP1O14490 977 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 SUPT7LO94864 414 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 ARF4P18085 180 aaPredicted RBP13.78□□□□□ -0.2
SYNE3-201ENST00000334258 NR4A1P22736 598 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 ADCYAP1R1P41586 468 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 CD300CQ08708 224 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 ADIGQ0VDE8 80 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 SLC36A3Q495N2 470 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 NAPEPLDQ6IQ20 393 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 NIPAL1Q6NVV3 410 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 USP50Q70EL3 339 aaPredicted RBP13.78□□□□□ -0.2
SYNE3-201ENST00000334258 FAM35AQ86V20 835 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 SLC2A14Q8TDB8 520 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 EXT2Q93063 718 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 ACDQ96AP0 544 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 NRBF2Q96F24 287 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 C11orf84Q9BUA3 381 aaPredicted RBP13.78□□□□□ -0.2
SYNE3-201ENST00000334258 OSBPL2Q9H1P3 480 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 FANCEQ9HB96 536 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 GNPTGQ9UJJ9 305 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 RLFQ13129 1914 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 ZBTB42B2RXF5 422 aa13.78□□□□□ -0.2
SYNE3-201ENST00000334258 TARM1B6A8C7 271 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms