RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 HACD2Q6Y1H2 254 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 LYSMD3Q7Z3D4 306 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 PCYOX1LQ8NBM8 494 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 CCDC126Q96EE4 140 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 FBXL20Q96IG2 436 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 MUC3BQ9H195 1237 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 TCAF1Q9Y4C2 921 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 TRIM64CA6NLI5 447 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 C9JVG2 144 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 UBFD1O14562 309 aaKnown RBP23.72■■□□□ 1.39
TSKU-201ENST00000333090 PSMD3O43242 534 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 CCNA1P78396 465 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 SFSWAPQ12872 951 aaKnown RBP23.72■■□□□ 1.39
TSKU-201ENST00000333090 INTS11Q5TA45 600 aaKnown RBP23.72■■□□□ 1.39
TSKU-201ENST00000333090 IL31Q6EBC2 164 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 DENND5AQ6IQ26 1287 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 RWDD4Q6NW29 188 aaKnown RBP23.72■■□□□ 1.39
TSKU-201ENST00000333090 NOTUMQ6P988 496 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 CYHR1Q6ZMK1 362 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 FASTKD5Q7L8L6 764 aaKnown RBP23.72■■□□□ 1.39
TSKU-201ENST00000333090 DPF3Q92784 378 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 ZNF419Q96HQ0 510 aaPredicted RBP23.72■■□□□ 1.39
TSKU-201ENST00000333090 NPLQ9BXD5 320 aaPredicted RBP23.72■■□□□ 1.39
TSKU-201ENST00000333090 TBC1D23Q9NUY8 699 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 HACD3Q9P035 362 aa23.72■■□□□ 1.39
TSKU-201ENST00000333090 ZNF701M0R085 212 aaPredicted RBP23.71■■□□□ 1.39
TSKU-201ENST00000333090 PMPCBO75439 489 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 HMOX2P30519 316 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 DAOAP59103 153 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 CBX3Q13185 183 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 PMS2P3Q13401 168 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 SLC44A4Q53GD3 710 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 OFCC1Q8IZS5 231 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 PACRGLQ8N7B6 248 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 OSMRQ99650 979 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 C16orf70Q9BSU1 422 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 OAZ3Q9UMX2 235 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 MRPL42Q9Y6G3 142 aaKnown RBP23.71■■□□□ 1.39
TSKU-201ENST00000333090 A0A1W2PPW3 197 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 H3BMQ9 156 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 SUPT7LO94864 414 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 ALDOCP09972 364 aaKnown RBP23.71■■□□□ 1.39
TSKU-201ENST00000333090 IL10P22301 178 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 CHRNA4P43681 627 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 INPP5AQ14642 412 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 LARP4Q71RC2 724 aaKnown RBP eCLIP23.71■■□□□ 1.395e-6■■□□□ 12.4
TSKU-201ENST00000333090 GPRIN1Q7Z2K8 1008 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 C3orf30Q96M34 536 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 COG8Q96MW5 612 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 RHOBTB2Q9BYZ6 727 aa23.71■■□□□ 1.39
TSKU-201ENST00000333090 RPF2Q9H7B2 306 aaKnown RBP23.71■■□□□ 1.39
TSKU-201ENST00000333090 A0A0G2JLL6 359 aaPredicted RBP23.7■■□□□ 1.39
TSKU-201ENST00000333090 A0A0J9YYE9 177 aa23.7■■□□□ 1.39
TSKU-201ENST00000333090 PAMP19021 973 aa23.7■■□□□ 1.39
TSKU-201ENST00000333090 FASP25445 335 aa23.7■■□□□ 1.39
TSKU-201ENST00000333090 PSMA4P25789 261 aaKnown RBP23.7■■□□□ 1.39
TSKU-201ENST00000333090 PNPLA4P41247 253 aa23.7■■□□□ 1.39
TSKU-201ENST00000333090 LILRA4P59901 499 aa23.7■■□□□ 1.39
TSKU-201ENST00000333090 SV2CQ496J9 727 aa23.7■■□□□ 1.39
TSKU-201ENST00000333090 NEPROQ6NW34 567 aa23.7■■□□□ 1.39
TSKU-201ENST00000333090 PRRT2Q7Z6L0 340 aaPredicted RBP23.7■■□□□ 1.39
TSKU-201ENST00000333090 ROPN1LQ96C74 230 aa23.7■■□□□ 1.39
TSKU-201ENST00000333090 DCPSQ96C86 337 aaKnown RBP23.7■■□□□ 1.39
TSKU-201ENST00000333090 RNF39Q9H2S5 420 aa23.7■■□□□ 1.39
TSKU-201ENST00000333090 AGPAT4Q9NRZ5 378 aa23.7■■□□□ 1.39
TSKU-201ENST00000333090 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.7■■□□□ 1.39
TSKU-201ENST00000333090 SH3BP1Q9Y3L3 701 aa23.7■■□□□ 1.39
TSKU-201ENST00000333090 LTA4HP09960 611 aaKnown RBP23.7■■□□□ 1.38
TSKU-201ENST00000333090 PSMD7P51665 324 aa23.7■■□□□ 1.38
TSKU-201ENST00000333090 CAPRIN1Q14444 709 aaKnown RBP23.7■■□□□ 1.38
TSKU-201ENST00000333090 VPS26BQ4G0F5 336 aa23.7■■□□□ 1.38
TSKU-201ENST00000333090 ADAMTS16Q8TE57 1224 aa23.7■■□□□ 1.38
TSKU-201ENST00000333090 FSD1LQ9BXM9 530 aa23.7■■□□□ 1.38
TSKU-201ENST00000333090 GSTO2Q9H4Y5 243 aa23.7■■□□□ 1.38
TSKU-201ENST00000333090 POLR1BQ9H9Y6 1135 aa23.7■■□□□ 1.38
TSKU-201ENST00000333090 NRCAMQ92823 1304 aa23.7■■□□□ 1.38
TSKU-201ENST00000333090 VARSP26640 1264 aaKnown RBP23.69■■□□□ 1.38
TSKU-201ENST00000333090 OXTRP30559 389 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 ACADVLP49748 655 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 SLC36A3Q495N2 470 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 FGD3Q5JSP0 725 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 WSCD1Q658N2 575 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 XKR5Q6UX68 686 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 C19orf60Q96EN9 201 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 MAP10Q9P2G4 905 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 GIMAP2Q9UG22 337 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 CDH7Q9ULB5 785 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 COL1A2P08123 1366 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 TSC2P49815 1807 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 CLOCKO15516 846 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 ANXA9O76027 345 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 RAB39AQ14964 217 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 IRAK1BP1Q5VVH5 260 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 TMEM26Q6ZUK4 368 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 CMTR2Q8IYT2 770 aaKnown RBP23.69■■□□□ 1.38
TSKU-201ENST00000333090 RNF34Q969K3 372 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 ZUFSPQ96AP4 578 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 TRIM8Q9BZR9 551 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 TRIM15Q9C019 465 aa23.69■■□□□ 1.38
TSKU-201ENST00000333090 GPX3P22352 226 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms