RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 LRRC3BQ96PB8 259 aa20.22■□□□□ 0.83
SUMO3-201ENST00000332859 RBBP8Q99708 897 aa20.22■□□□□ 0.83
SUMO3-201ENST00000332859 SAR1AQ9NR31 198 aa20.22■□□□□ 0.83
SUMO3-201ENST00000332859 IARS2Q9NSE4 1012 aaKnown RBP20.22■□□□□ 0.83
SUMO3-201ENST00000332859 ZFP69BQ9UJL9 534 aa20.22■□□□□ 0.83
SUMO3-201ENST00000332859 SLC25A13Q9UJS0 675 aa20.22■□□□□ 0.83
SUMO3-201ENST00000332859 PSAT1Q9Y617 370 aa20.22■□□□□ 0.83
SUMO3-201ENST00000332859 LINC01565O15544 149 aa20.21■□□□□ 0.83
SUMO3-201ENST00000332859 HNRNPCL1O60812 293 aaKnown RBP20.21■□□□□ 0.83
SUMO3-201ENST00000332859 MAPK8P45983 427 aa20.21■□□□□ 0.83
SUMO3-201ENST00000332859 TMPRSS15P98073 1019 aa20.21■□□□□ 0.83
SUMO3-201ENST00000332859 SULT2A1Q06520 285 aa20.21■□□□□ 0.83
SUMO3-201ENST00000332859 RIPK1Q13546 671 aa20.21■□□□□ 0.83
SUMO3-201ENST00000332859 SNCBQ16143 134 aa20.21■□□□□ 0.83
SUMO3-201ENST00000332859 ASTLQ6HA08 431 aaPredicted RBP20.21■□□□□ 0.83
SUMO3-201ENST00000332859 SYCE2Q6PIF2 218 aa20.21■□□□□ 0.83
SUMO3-201ENST00000332859 INPP5DQ92835 1189 aa20.21■□□□□ 0.83
SUMO3-201ENST00000332859 ADGRE3Q9BY15 652 aa20.21■□□□□ 0.83
SUMO3-201ENST00000332859 OBP2AQ9NY56 170 aa20.21■□□□□ 0.83
SUMO3-201ENST00000332859 SLC2A6Q9UGQ3 507 aa20.21■□□□□ 0.83
SUMO3-201ENST00000332859 CEP290O15078 2479 aa20.2■□□□□ 0.83
SUMO3-201ENST00000332859 MROH6A6NGR9 719 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 SMAD6O43541 496 aaKnown RBP20.2■□□□□ 0.82
SUMO3-201ENST00000332859 DNAJC6O75061 913 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 VAPBO95292 243 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 DLDP09622 509 aaKnown RBP20.2■□□□□ 0.82
SUMO3-201ENST00000332859 MAGEA12P43365 314 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 CSNK1DP48730 415 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 RASSF2P50749 326 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 CSE1LP55060 971 aaKnown RBP20.2■□□□□ 0.82
SUMO3-201ENST00000332859 BST1Q10588 318 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 PDE1CQ14123 709 aaPredicted RBP20.2■□□□□ 0.82
SUMO3-201ENST00000332859 DHCR24Q15392 516 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 CHI3L2Q15782 390 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 CNGA3Q16281 694 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 ATXN7L2Q5T6C5 722 aaPredicted RBP20.2■□□□□ 0.82
SUMO3-201ENST00000332859 STRA8Q7Z7C7 330 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 TNS4Q8IZW8 715 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.2■□□□□ 0.82
SUMO3-201ENST00000332859 BLOC1S5Q8TDH9 187 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 RMDN1Q96DB5 314 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 RAB3IPQ96QF0 476 aaPredicted RBP20.2■□□□□ 0.82
SUMO3-201ENST00000332859 AGAP2Q99490 1192 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 TUBB6Q9BUF5 446 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 TRPV4Q9HBA0 871 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.2■□□□□ 0.827e-7■□□□□ 10.3
SUMO3-201ENST00000332859 DCTN4Q9UJW0 460 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 HS3ST2Q9Y278 367 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 PCDHGC4Q9Y5F7 938 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 HGSO14964 777 aaPredicted RBP20.2■□□□□ 0.82
SUMO3-201ENST00000332859 IGSF6O95976 241 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 ADH1CP00326 375 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 CYP17A1P05093 508 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 HOXB8P17481 243 aaPredicted RBP20.2■□□□□ 0.82
SUMO3-201ENST00000332859 ARCN1P48444 511 aaKnown RBP20.2■□□□□ 0.82
SUMO3-201ENST00000332859 SERPINB8P50452 374 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 LIMK2P53671 638 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 KCNJ2P63252 427 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 OCRLQ01968 901 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 TRAF2Q12933 501 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 THOC5Q13769 683 aaKnown RBP20.2■□□□□ 0.82
SUMO3-201ENST00000332859 EML3Q32P44 896 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 LPCAT1Q8NF37 534 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 GABPB2Q8TAK5 448 aaPredicted RBP20.2■□□□□ 0.82
SUMO3-201ENST00000332859 BRSK1Q8TDC3 778 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 PEX13Q92968 403 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 FAM167BQ9BTA0 163 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 MECRQ9BV79 373 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 TMEM120AQ9BXJ8 343 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 TM6SF2Q9BZW4 377 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 LRMDAQ9H2I8 198 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 KCNK13Q9HB14 408 aa20.2■□□□□ 0.82
SUMO3-201ENST00000332859 A0A0G2JND7 137 aa20.19■□□□□ 0.82
SUMO3-201ENST00000332859 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.19■□□□□ 0.82
SUMO3-201ENST00000332859 SNNO75324 88 aaPredicted RBP20.19■□□□□ 0.82
SUMO3-201ENST00000332859 PRLP01236 227 aa20.19■□□□□ 0.82
SUMO3-201ENST00000332859 ADH5P11766 374 aa20.19■□□□□ 0.82
SUMO3-201ENST00000332859 SRCP12931 536 aa20.19■□□□□ 0.82
SUMO3-201ENST00000332859 TYK2P29597 1187 aa20.19■□□□□ 0.82
SUMO3-201ENST00000332859 CTSOP43234 321 aaPredicted RBP20.19■□□□□ 0.82
SUMO3-201ENST00000332859 CNTN4Q8IWV2 1026 aa20.19■□□□□ 0.82
SUMO3-201ENST00000332859 AHI1Q8N157 1196 aa20.19■□□□□ 0.82
SUMO3-201ENST00000332859 ISG20Q96AZ6 181 aaKnown RBP20.19■□□□□ 0.82
SUMO3-201ENST00000332859 KCNK4Q9NYG8 393 aa20.19■□□□□ 0.82
SUMO3-201ENST00000332859 RIMKLBQ9ULI2 386 aa20.19■□□□□ 0.82
SUMO3-201ENST00000332859 HOXC11O43248 304 aaPredicted RBP20.18■□□□□ 0.82
SUMO3-201ENST00000332859 TIMM44O43615 452 aa20.18■□□□□ 0.82
SUMO3-201ENST00000332859 LDB2O43679 373 aa20.18■□□□□ 0.82
SUMO3-201ENST00000332859 PLIN3O60664 434 aa20.18■□□□□ 0.82
SUMO3-201ENST00000332859 SIN3BO75182 1162 aa20.18■□□□□ 0.82
SUMO3-201ENST00000332859 NFATC1O95644 943 aa20.18■□□□□ 0.82
SUMO3-201ENST00000332859 ARNTP27540 789 aa20.18■□□□□ 0.82
SUMO3-201ENST00000332859 HADHAP40939 763 aa20.18■□□□□ 0.82
SUMO3-201ENST00000332859 UGP2Q16851 508 aa20.18■□□□□ 0.82
SUMO3-201ENST00000332859 TAF1BQ53T94 588 aaPredicted RBP20.18■□□□□ 0.82
SUMO3-201ENST00000332859 N4BP2L1Q5TBK1 243 aaPredicted RBP20.18■□□□□ 0.82
SUMO3-201ENST00000332859 KIAA0907Q7Z7F0 614 aaPredicted RBP20.18■□□□□ 0.82
SUMO3-201ENST00000332859 CLNKQ7Z7G1 428 aa20.18■□□□□ 0.82
SUMO3-201ENST00000332859 MAGEC3Q8TD91 643 aa20.18■□□□□ 0.82
SUMO3-201ENST00000332859 RPL10LQ96L21 214 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms