RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 VWA7Q9Y334 891 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 ACTL7AQ9Y615 435 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 MYO16Q9Y6X6 1858 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 PRSS51A0A1B0GVH4 220 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 S1PR4O95977 384 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 SLC4A1P02730 911 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 HMBSP08397 361 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 PRSS56P0CW18 603 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 SMIM18P0DKX4 95 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 DNAJB1P25685 340 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 ADSLP30566 484 aaPredicted RBP13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 EFEMP1Q12805 493 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 PITRM1Q5JRX3 1037 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 SIRPB2Q5JXA9 342 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 MARC1Q5VT66 337 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 ISCA2Q86U28 154 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 MIB1Q86YT6 1006 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 ST13P4Q8IZP2 240 aaPredicted RBP13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 EXT2Q93063 718 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 SLC39A13Q96H72 371 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 TBATAQ96M53 351 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 BTBD9Q96Q07 612 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 ARHGAP39Q9C0H5 1083 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 GSTO2Q9H4Y5 243 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 UXTQ9UBK9 157 aaPredicted RBP13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 PRORSD1PA6NEY8 169 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 CSPG5O95196 566 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 HSPA1AP0DMV8 641 aaKnown RBP13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 HSPA1BP0DMV9 641 aaKnown RBP13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 FKBP1BP68106 108 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 PDAP1Q13442 181 aaKnown RBP13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 LRP8Q14114 963 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 MAP3K21Q5TCX8 1036 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 AGAP9Q5VTM2 703 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 TMEM102Q8N9M5 508 aaPredicted RBP13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 SLC45A3Q96JT2 553 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 CNBD2Q96M20 576 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 PRKD2Q9BZL6 878 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 MEAF6Q9HAF1 191 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 PRDM5Q9NQX1 630 aaPredicted RBP13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 TRMT13Q9NUP7 481 aaKnown RBP13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 CACNA2D2Q9NY47 1150 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 GMIPQ9P107 970 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 APPL1Q9UKG1 709 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 AP4B1Q9Y6B7 739 aa13.48□□□□□ -0.25
TUBA1B-201ENST00000332858 A0A1B0GTW7 788 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 MUSKO15146 869 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 UBDO15205 165 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 SUPT7LO94864 414 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 NME5P56597 212 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 YBX1P67809 324 aaKnown RBP13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 TIAL1Q01085 375 aaKnown RBP eCLIP13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 ROR2Q01974 943 aaKnown RBP13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 FASTKQ14296 549 aaKnown RBP13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 FBXO48Q5FWF7 155 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 UMODL1-AS1Q8N2C9 162 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 RYBPQ8N488 228 aaPredicted RBP13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 ATAD1Q8NBU5 361 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 ARRDC2Q8TBH0 407 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 FAM110BQ8TC76 370 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 LRCH3Q96II8 777 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 B3GALT6Q96L58 329 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 MRPL1Q9BYD6 325 aaKnown RBP13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 DSEQ9UL01 958 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 ARL5AQ9Y689 179 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 C9JVG2 144 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 PSMD12O00232 456 aaPredicted RBP13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 LDB2O43679 373 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 SIX3O95343 332 aaPredicted RBP13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 RENBPP51606 427 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 RFTN1Q14699 578 aaPredicted RBP13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 MAPRE1Q15691 268 aaKnown RBP13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 RAP1GAP2Q684P5 730 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 FBXL22Q6P050 247 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 ZNF549Q6P9A3 640 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 CYP2R1Q6VVX0 501 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 KIAA0408Q6ZU52 694 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 TRIB2Q92519 343 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 SERPINB11Q96P15 392 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 TRIM4Q9C037 500 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 PRG3Q9Y2Y8 225 aaPredicted RBP13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 TRAF6Q9Y4K3 522 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 PATJQ8NI35 1801 aa13.47□□□□□ -0.25
TUBA1B-201ENST00000332858 MROH6A6NGR9 719 aa13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 DENRO43583 198 aaKnown RBP13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 ASGR1P07306 291 aa13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 ATXN1LP0C7T5 689 aaKnown RBP13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 ACVRL1P37023 503 aa13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 TBX4P57082 545 aa13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 SEMA3AQ14563 771 aa13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 RARS2Q5T160 578 aaKnown RBP13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 REP15Q6BDI9 236 aa13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 RTN4RL1Q86UN2 441 aaPredicted RBP13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 MARVELD2Q8N4S9 558 aa13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 UPF1Q92900 1129 aaKnown RBP eCLIP13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 TRIM62Q9BVG3 475 aa13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 POLR3BQ9NW08 1133 aaPredicted RBP13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 TLR6Q9Y2C9 796 aa13.46□□□□□ -0.25
TUBA1B-201ENST00000332858 WISP3O95389 354 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms