RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 EPHA3P29320 983 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 DNAJB13P59910 316 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 ACTR3P61158 418 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 RPS24P62847 133 aaKnown RBP17.47■□□□□ 0.39
DDX28-201ENST00000332395 LSM12Q3MHD2 195 aaKnown RBP17.47■□□□□ 0.39
DDX28-201ENST00000332395 HECTD3Q5T447 861 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 KLC3Q6P597 504 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 TRIM67Q6ZTA4 783 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 FRMD7Q6ZUT3 714 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 DTX3LQ8TDB6 740 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 SCG3Q8WXD2 468 aaKnown RBP17.47■□□□□ 0.39
DDX28-201ENST00000332395 PEX13Q92968 403 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 UBXN10Q96LJ8 280 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 PRICKLE1Q96MT3 831 aaPredicted RBP17.47■□□□□ 0.39
DDX28-201ENST00000332395 MGME1Q9BQP7 344 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 SUDS3Q9H7L9 328 aaPredicted RBP17.47■□□□□ 0.39
DDX28-201ENST00000332395 STX18Q9P2W9 335 aaKnown RBP17.47■□□□□ 0.39
DDX28-201ENST00000332395 BACE2Q9Y5Z0 518 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 H3BNC9 293 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 MYCP01106 439 aaPredicted RBP17.47■□□□□ 0.39
DDX28-201ENST00000332395 CXCL10P02778 98 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 COX4I1P13073 169 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 ARHGEF6Q15052 776 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 RALGPS1Q5JS13 557 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 C1orf146Q5VVC0 180 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 KLHDC10Q6PID8 442 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 ACAD11Q709F0 780 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 BBS5Q8N3I7 341 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 DNAJC1Q96KC8 554 aaKnown RBP17.47■□□□□ 0.39
DDX28-201ENST00000332395 HIPK3Q9H422 1215 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 RETREG1Q9H6L5 497 aa17.47■□□□□ 0.39
DDX28-201ENST00000332395 BUD23O43709 281 aaKnown RBP17.46■□□□□ 0.39
DDX28-201ENST00000332395 SEC24AO95486 1093 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 FESP07332 822 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 HMGA1P17096 107 aaKnown RBP17.46■□□□□ 0.39
DDX28-201ENST00000332395 ATP6V1C1P21283 382 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 CDKN2DP55273 166 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 PRMT2P55345 433 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 PFKPQ01813 784 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 SLC34A1Q06495 639 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 NSUN2Q08J23 767 aaKnown RBP eCLIP17.46■□□□□ 0.39
DDX28-201ENST00000332395 LAMB3Q13751 1172 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 PTPRCAPQ14761 206 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 KIAA1841Q6NSI8 718 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 DEFB128Q7Z7B8 93 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 BRSK1Q8TDC3 778 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 ANKRD49Q8WVL7 239 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 STON2Q8WXE9 905 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 SPON2Q9BUD6 331 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 SEPT3Q9UH03 358 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 CDYLQ9Y232 598 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 SSX2IPQ9Y2D8 614 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 AHCYL1O43865 530 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 GLP2RO95838 553 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 GOT2P00505 430 aaKnown RBP17.46■□□□□ 0.39
DDX28-201ENST00000332395 KLKB1P03952 638 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 JUNP05412 331 aaKnown RBP17.46■□□□□ 0.39
DDX28-201ENST00000332395 RBP1P09455 135 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 PIRTP0C851 137 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 SERPINB5P36952 375 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 PEX6Q13608 980 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 CUL3Q13618 768 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 PDCD2Q16342 344 aaPredicted RBP17.46■□□□□ 0.39
DDX28-201ENST00000332395 TRIM68Q6AZZ1 485 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.46■□□□□ 0.39
DDX28-201ENST00000332395 RNF168Q8IYW5 571 aaPredicted RBP17.46■□□□□ 0.39
DDX28-201ENST00000332395 KDM1BQ8NB78 822 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 SPDYE1Q8NFV5 336 aaPredicted RBP17.46■□□□□ 0.39
DDX28-201ENST00000332395 PLD4Q96BZ4 506 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 CCDC126Q96EE4 140 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 IGSF21Q96ID5 467 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 CNDP1Q96KN2 507 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 PSKH2Q96QS6 385 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 TRIB3Q96RU7 358 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 CINPQ9BW66 212 aaPredicted RBP17.46■□□□□ 0.39
DDX28-201ENST00000332395 PPP1R12CQ9BZL4 782 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 UBA2Q9UBT2 640 aaPredicted RBP17.46■□□□□ 0.39
DDX28-201ENST00000332395 AFF4Q9UHB7 1163 aaKnown RBP17.46■□□□□ 0.39
DDX28-201ENST00000332395 CRYL1Q9Y2S2 319 aa17.46■□□□□ 0.39
DDX28-201ENST00000332395 DPPA5A6NC42 116 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 A8MT66 165 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 CLDN11O75508 207 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 RPP40O75818 363 aaKnown RBP17.45■□□□□ 0.38
DDX28-201ENST00000332395 ZMPSTE24O75844 475 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 STC2O76061 302 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 IPO13O94829 963 aaKnown RBP17.45■□□□□ 0.38
DDX28-201ENST00000332395 SNUPNO95149 360 aaKnown RBP17.45■□□□□ 0.38
DDX28-201ENST00000332395 WISP3O95389 354 aaPredicted RBP17.45■□□□□ 0.38
DDX28-201ENST00000332395 NDST3O95803 873 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 ITGAXP20702 1163 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 KCNA5P22460 613 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 CORO1AP31146 461 aaKnown RBP17.45■□□□□ 0.38
DDX28-201ENST00000332395 VHLP40337 213 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 OXCT1P55809 520 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 MRPS35P82673 323 aaKnown RBP17.45■□□□□ 0.38
DDX28-201ENST00000332395 ACAP2Q15057 778 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 OR13C4Q8NGS5 318 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 SHKBP1Q8TBC3 707 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 ACTRT2Q8TDY3 377 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 LENG8Q96PV6 779 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms