RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 SYPL2Q5VXT5 272 aa14.89□□□□□ -0.03
CTHRC1-201ENST00000330295 NKAIN2Q5VXU1 208 aa14.89□□□□□ -0.03
CTHRC1-201ENST00000330295 PAPD7Q5XG87 772 aaKnown RBP14.89□□□□□ -0.03
CTHRC1-201ENST00000330295 FOXR2Q6PJQ5 311 aa14.89□□□□□ -0.03
CTHRC1-201ENST00000330295 ATL2Q8NHH9 583 aa14.89□□□□□ -0.03
CTHRC1-201ENST00000330295 KIAA1524Q8TCG1 905 aa14.89□□□□□ -0.03
CTHRC1-201ENST00000330295 SLC35F5Q8WV83 523 aa14.89□□□□□ -0.03
CTHRC1-201ENST00000330295 NELFBQ8WX92 580 aa14.89□□□□□ -0.03
CTHRC1-201ENST00000330295 WDR92Q96MX6 357 aa14.89□□□□□ -0.03
CTHRC1-201ENST00000330295 TMEM9Q9P0T7 183 aa14.89□□□□□ -0.03
CTHRC1-201ENST00000330295 TACC2O95359 2948 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 A6NCN8 305 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 O00370 1275 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 AREL1O15033 823 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 CLDN11O75508 207 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 FBXO21O94952 628 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 TRIM49P0CI25 452 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 TRIM49CP0CI26 452 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 GPR3P46089 330 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 MXI1P50539 228 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 CCNHP51946 323 aaPredicted RBP14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 RNASE9P60153 205 aaKnown RBP14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 PPP3CAQ08209 521 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 PAK1Q13153 545 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 ZRSR2Q15696 482 aaKnown RBP14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 DCAF17Q5H9S7 520 aaPredicted RBP14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 C17orf82Q86X59 251 aaPredicted RBP14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 IRF2BP1Q8IU81 584 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 DCAF4L2Q8NA75 395 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 FAM149B1Q96BN6 582 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 EEF2KMTQ96G04 330 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 DPYSL5Q9BPU6 564 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 APOOQ9BUR5 198 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 TWSG1Q9GZX9 223 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 MIS12Q9H081 205 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 ZDHHC6Q9H6R6 413 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 APMAPQ9HDC9 416 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 CROTQ9UKG9 612 aa14.88□□□□□ -0.03
CTHRC1-201ENST00000330295 PKDREJQ9NTG1 2253 aa14.87□□□□□ -0.03
CTHRC1-201ENST00000330295 ITGA3P26006 1051 aa14.87□□□□□ -0.03
CTHRC1-201ENST00000330295 DNA2P51530 1060 aa14.87□□□□□ -0.03
CTHRC1-201ENST00000330295 SQSTM1Q13501 440 aa14.87□□□□□ -0.03
CTHRC1-201ENST00000330295 AUHQ13825 339 aaKnown RBP14.87□□□□□ -0.03
CTHRC1-201ENST00000330295 ELOAQ14241 798 aaKnown RBP14.87□□□□□ -0.03
CTHRC1-201ENST00000330295 LRRC14Q15048 493 aa14.87□□□□□ -0.03
CTHRC1-201ENST00000330295 CARD16Q5EG05 197 aa14.87□□□□□ -0.03
CTHRC1-201ENST00000330295 PCDH20Q8N6Y1 951 aaKnown RBP14.87□□□□□ -0.03
CTHRC1-201ENST00000330295 MLKLQ8NB16 471 aa14.87□□□□□ -0.03
CTHRC1-201ENST00000330295 FBXL13Q8NEE6 735 aa14.87□□□□□ -0.03
CTHRC1-201ENST00000330295 CXorf40AQ8TE69 158 aa14.87□□□□□ -0.03
CTHRC1-201ENST00000330295 CEP44Q9C0F1 390 aa14.87□□□□□ -0.03
CTHRC1-201ENST00000330295 TMEM168Q9H0V1 697 aa14.87□□□□□ -0.03
CTHRC1-201ENST00000330295 NUP62CLQ9H1M0 184 aa14.87□□□□□ -0.03
CTHRC1-201ENST00000330295 CLSTN2Q9H4D0 955 aa14.87□□□□□ -0.03
CTHRC1-201ENST00000330295 FBXO8Q9NRD0 319 aa14.87□□□□□ -0.03
CTHRC1-201ENST00000330295 VANGL2Q9ULK5 521 aa14.87□□□□□ -0.03
CTHRC1-201ENST00000330295 OR1A2Q9Y585 309 aa14.87□□□□□ -0.03
CTHRC1-201ENST00000330295 IGHV1OR21-1A0A087WYE8 117 aa14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 PPP1R3GB7ZBB8 358 aa14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 DPM1O60762 260 aa14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 KATNA1O75449 491 aa14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 TRUB2O95900 331 aaKnown RBP14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 IGLV3-25P01717 112 aa14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 RHOCP08134 193 aa14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 PTGER4P35408 488 aa14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 PMS1P54277 932 aaKnown RBP14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 PER3P56645 1201 aa14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 ZNF805Q5CZA5 627 aa14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 SLC6A19Q695T7 634 aa14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 TMEM71Q6P5X7 295 aa14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 CCL4L1Q8NHW4 92 aa14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 OR1E3Q8WZA6 343 aa14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 PNPLA2Q96AD5 504 aa14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 SNRNP40Q96DI7 357 aaKnown RBP14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 RANBP9Q96S59 729 aa14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 ASF1BQ9NVP2 202 aa14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 CTNND2Q9UQB3 1225 aa14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 ZNF451Q9Y4E5 1061 aa14.86□□□□□ -0.03
CTHRC1-201ENST00000330295 A0A0D9SEW6 157 aa14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 PIPSLA2A3N6 862 aa14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 TRIM49BA6NDI0 452 aa14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 CREG1O75629 220 aa14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 RECKO95980 971 aa14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 VDRP11473 427 aa14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 TIMP2P16035 220 aa14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 BMP6P22004 513 aa14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 NFKBIAP25963 317 aa14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 CDH4P55283 916 aa14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 MCCD1P59942 119 aaPredicted RBP14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 BIRC2Q13490 618 aa14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 EIF4EBP2Q13542 120 aaPredicted RBP14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 INPP5AQ14642 412 aa14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 TPD52L1Q16890 204 aaPredicted RBP14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 WSCD2Q2TBF2 565 aa14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 LRRC73Q5JTD7 316 aa14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 TTI2Q6NXR4 508 aa14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 LCLAT1Q6UWP7 414 aa14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 BEND5Q7L4P6 421 aa14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 SEMA4DQ92854 862 aa14.85□□□□□ -0.03
CTHRC1-201ENST00000330295 HSFY1Q96LI6 401 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms