RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 ARTNQ5T4W7 220 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 DUPD1Q68J44 220 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 UGT3A1Q6NUS8 523 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 NPNTQ6UXI9 565 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 LCA5Q86VQ0 697 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 RIBC1Q8N443 379 aaPredicted RBP5.19□□□□□ -1.58
LRIT3-201ENST00000327908 TRAM1L1Q8N609 369 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 CYB5D2Q8WUJ1 264 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 ZC3H10Q96K80 434 aaKnown RBP5.19□□□□□ -1.58
LRIT3-201ENST00000327908 KLHL32Q96NJ5 620 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 TMPRSS4Q9NRS4 437 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 SMOXQ9NWM0 555 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 FBXL12Q9NXK8 326 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 FCF1Q9Y324 198 aaKnown RBP5.19□□□□□ -1.58
LRIT3-201ENST00000327908 ZNF711Q9Y462 761 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 PCDHB1Q9Y5F3 818 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 TRIOBPQ9H2D6 2365 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 NYNRINQ9P2P1 1898 aaKnown RBP5.19□□□□□ -1.58
LRIT3-201ENST00000327908 A6NNZ2 444 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 TTC34A8MYJ7 566 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 ANKRD66B4E2M5 251 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 CACNB4O00305 520 aaPredicted RBP5.19□□□□□ -1.58
LRIT3-201ENST00000327908 WNT9AO14904 365 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 VEGFDO43915 354 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 LEFTY1O75610 366 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 UGT2B4P06133 528 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 CDK4P11802 303 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 CD27P26842 260 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 PSMB4P28070 264 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 ADRA1AP35348 466 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 MMP12P39900 470 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 P2RY2P41231 377 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 SEC13P55735 322 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 SNX1Q13596 522 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 STAT4Q14765 748 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 ARSIQ5FYB1 569 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 KCTD11Q693B1 232 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 RANBP10Q6VN20 620 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 KYAT3Q6YP21 454 aaKnown RBP5.19□□□□□ -1.58
LRIT3-201ENST00000327908 SLC26A11Q86WA9 606 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 LPCAT1Q8NF37 534 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 IPMKQ8NFU5 416 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 GLMNQ92990 594 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 STAMBPL1Q96FJ0 436 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 VPS35Q96QK1 796 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 FAM129BQ96TA1 746 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 TMEM121Q9BTD3 319 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 EPHX3Q9H6B9 360 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 NOD2Q9HC29 1040 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 INTS10Q9NVR2 710 aaKnown RBP5.19□□□□□ -1.58
LRIT3-201ENST00000327908 TMCO1Q9UM00 188 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 SOX13Q9UN79 622 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 TCAF1Q9Y4C2 921 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 TTLL3Q9Y4R7 772 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 FADS3Q9Y5Q0 445 aa5.19□□□□□ -1.58
LRIT3-201ENST00000327908 CKAP5Q14008 2032 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 KCNK1O00180 336 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 AREL1O15033 823 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 RPP40O75818 363 aaKnown RBP5.18□□□□□ -1.58
LRIT3-201ENST00000327908 USP1O94782 785 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 SEC31AO94979 1220 aaKnown RBP5.18□□□□□ -1.58
LRIT3-201ENST00000327908 CHRM1P11229 460 aaPredicted RBP5.18□□□□□ -1.58
LRIT3-201ENST00000327908 HNRNPA2B1P22626 353 aaKnown RBP5.18□□□□□ -1.58
LRIT3-201ENST00000327908 CXCR5P32302 372 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 GGCXP38435 758 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 IRAK1P51617 712 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 EIF3BP55884 814 aaKnown RBP5.18□□□□□ -1.58
LRIT3-201ENST00000327908 NAA20P61599 178 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 ZBTB17Q13105 803 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 DNAJC3Q13217 504 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 THOC5Q13769 683 aaKnown RBP5.18□□□□□ -1.58
LRIT3-201ENST00000327908 QPCTQ16769 361 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 RAB6CQ53S08 254 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 C2orf27AQ580R0 203 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 RNASEH2BQ5TBB1 312 aaKnown RBP5.18□□□□□ -1.58
LRIT3-201ENST00000327908 HIBCHQ6NVY1 386 aaPredicted RBP5.18□□□□□ -1.58
LRIT3-201ENST00000327908 WDR93Q6P2C0 686 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 TXNDC11Q6PKC3 985 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 ADAMTSL4Q6UY14 1074 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 GLT6D1Q7Z4J2 308 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 FSTL5Q8N475 847 aaPredicted RBP5.18□□□□□ -1.58
LRIT3-201ENST00000327908 BHMTQ93088 406 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 TSPAN17Q96FV3 270 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 TRIB3Q96RU7 358 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 FMO2Q99518 471 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 AP1M1Q9BXS5 423 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 RAB6CQ9H0N0 254 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 DDX47Q9H0S4 455 aaKnown RBP5.18□□□□□ -1.58
LRIT3-201ENST00000327908 ERVMER34-1Q9H9K5 563 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 ZFYVE1Q9HBF4 777 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 ETNK1Q9HBU6 452 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 A0A1B0GTW7 788 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 UBA6A0AVT1 1052 aaPredicted RBP5.18□□□□□ -1.58
LRIT3-201ENST00000327908 NRG2O14511 850 aaPredicted RBP5.18□□□□□ -1.58
LRIT3-201ENST00000327908 RNASEH2AO75792 299 aaKnown RBP5.18□□□□□ -1.58
LRIT3-201ENST00000327908 TIMP2P16035 220 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 GABRG2P18507 467 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 SOX9P48436 509 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 TTPAP49638 278 aa5.18□□□□□ -1.58
LRIT3-201ENST00000327908 CDR1P51861 262 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms