RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 PLK1P53350 603 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 STX1BP61266 288 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 RNF168Q8IYW5 571 aaPredicted RBP16.81■□□□□ 0.28
SSH1-201ENST00000326470 IPMKQ8NFU5 416 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 TBC1D15Q8TC07 691 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 PGAP3Q96FM1 320 aaPredicted RBP16.81■□□□□ 0.28
SSH1-201ENST00000326470 CENPNQ96H22 339 aaPredicted RBP16.81■□□□□ 0.28
SSH1-201ENST00000326470 CELF6Q96J87 481 aaKnown RBP16.81■□□□□ 0.28
SSH1-201ENST00000326470 ULBP1Q9BZM6 244 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 MUC3BQ9H195 1237 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 C8orf4Q9NR00 106 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 SLC38A7Q9NVC3 462 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 SBF1O95248 1867 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 NUP205Q92621 2012 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 FAM149AA5PLN7 773 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 YJEFN3A6XGL0 299 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 FOXD2O60548 495 aaPredicted RBP16.8■□□□□ 0.28
SSH1-201ENST00000326470 RBP1P09455 135 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 ZNF286BP0CG31 522 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 HSD17B1P14061 328 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 ZNF12P17014 697 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 PAMP19021 973 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 PSMA4P25789 261 aaKnown RBP16.8■□□□□ 0.28
SSH1-201ENST00000326470 ZNF33AQ06730 810 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 VGLL4Q14135 290 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 RAB39AQ14964 217 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 RBM20Q5T481 1227 aaKnown RBP16.8■□□□□ 0.28
SSH1-201ENST00000326470 GPR107Q5VW38 600 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 LCN8Q6JVE9 175 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 PRMT9Q6P2P2 845 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 GADL1Q6ZQY3 521 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 SPRED1Q7Z699 444 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 ANKRD23Q86SG2 305 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 ZNF354CQ86Y25 554 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 RNF135Q8IUD6 432 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 SPPL2CQ8IUH8 684 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 SLC22A9Q8IVM8 553 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 CPNE9Q8IYJ1 553 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 SEPT8Q92599 483 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 FEM1CQ96JP0 617 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 FCRL5Q96RD9 977 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 TRMOQ9BU70 441 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 NXF3Q9H4D5 531 aaKnown RBP16.8■□□□□ 0.28
SSH1-201ENST00000326470 GSTO2Q9H4Y5 243 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 FBRSL1Q9HCM7 1045 aaKnown RBP16.8■□□□□ 0.28
SSH1-201ENST00000326470 TREX1Q9NSU2 369 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 DDIT4Q9NX09 232 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 MAP10Q9P2G4 905 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 OR12D3Q9UGF7 316 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 SNX10Q9Y5X0 201 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 MCM3APO60318 1980 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 SHROOM3Q8TF72 1996 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 ATP6AP2A0A1C7CYW4 349 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 TMEM221A6NGB7 291 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 UBFD1O14562 309 aaKnown RBP16.8■□□□□ 0.28
SSH1-201ENST00000326470 ATP6AP2O75787 350 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 ANXA9O76027 345 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 LRIG2O94898 1065 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 RASAL1O95294 804 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 MT-CO1P00395 513 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 INHBBP09529 407 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 LTA4HP09960 611 aaKnown RBP16.8■□□□□ 0.28
SSH1-201ENST00000326470 ALDOCP09972 364 aaKnown RBP16.8■□□□□ 0.28
SSH1-201ENST00000326470 TFPTP0C1Z6 253 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 WARSP23381 471 aaKnown RBP16.8■□□□□ 0.28
SSH1-201ENST00000326470 CCT8P50990 548 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 DAOAP59103 153 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 BNIP2Q12982 314 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 CLEC6AQ6EIG7 209 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 KIAA0930Q6ICG6 404 aaPredicted RBP16.8■□□□□ 0.28
SSH1-201ENST00000326470 FASTKD5Q7L8L6 764 aaKnown RBP16.8■□□□□ 0.28
SSH1-201ENST00000326470 CMTR2Q8IYT2 770 aaKnown RBP16.8■□□□□ 0.28
SSH1-201ENST00000326470 PHF21BQ96EK2 531 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 LRCH3Q96II8 777 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 OLFM1Q99784 485 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 COLEC11Q9BWP8 271 aa16.8■□□□□ 0.28
SSH1-201ENST00000326470 FNDC1Q4ZHG4 1894 aaPredicted RBP16.8■□□□□ 0.28
SSH1-201ENST00000326470 SMIM28A0A1B0GU29 152 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 A0A1W2PPW3 197 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 AURKAO14965 403 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 ACOX3O15254 700 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 CLOCKO15516 846 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 USP2O75604 605 aaPredicted RBP16.79■□□□□ 0.28
SSH1-201ENST00000326470 NCAM1P13591 858 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 AKAP5P24588 427 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 MAP3K7CLP57077 242 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 SPIDRQ14159 915 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 SV2CQ496J9 727 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 MARCH8Q5T0T0 291 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 ABRAXAS1Q6UWZ7 409 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 KIAA0408Q6ZU52 694 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 CATSPER4Q7RTX7 472 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 SLC15A3Q8IY34 581 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 MINDY1Q8N5J2 469 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 CYGBQ8WWM9 190 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 MYRFLQ96LU7 910 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 FICDQ9BVA6 458 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 POLR1BQ9H9Y6 1135 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 TBC1D13Q9NVG8 400 aa16.79■□□□□ 0.28
SSH1-201ENST00000326470 ACTR3BQ9P1U1 418 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms