RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 GDI1P31150 447 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 GJA4P35212 333 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 OPRD1P41143 372 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 ABL2P42684 1182 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 MAPK8P45983 427 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 STK19P49842 368 aaPredicted RBP12.84□□□□□ -0.35
DDX39A-202ENST00000324340 KLC1Q07866 573 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 FRG1Q14331 258 aaKnown RBP12.84□□□□□ -0.35
DDX39A-202ENST00000324340 PCSK7Q16549 785 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 TBC1D25Q3MII6 688 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 DGKKQ5KSL6 1271 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 CERCAMQ5T4B2 595 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 GRAMD4Q6IC98 578 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 C22orf39Q6P5X5 142 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 UNC5AQ6ZN44 842 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 TMEM135Q86UB9 458 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.84□□□□□ -0.35
DDX39A-202ENST00000324340 LRRC34Q8IZ02 419 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 PCDH20Q8N6Y1 951 aaKnown RBP12.84□□□□□ -0.35
DDX39A-202ENST00000324340 OR2AP1Q8NGE2 309 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 MIPOL1Q8TD10 442 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 PTCD2Q8WV60 388 aaKnown RBP12.84□□□□□ -0.35
DDX39A-202ENST00000324340 EZH1Q92800 747 aaPredicted RBP12.84□□□□□ -0.35
DDX39A-202ENST00000324340 INPP5DQ92835 1189 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 VOPP1Q96AW1 172 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 CHFRQ96EP1 664 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 RANBP9Q96S59 729 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 KIFC1Q9BW19 673 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 ACSS3Q9H6R3 686 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 VPS37BQ9H9H4 285 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 PPCSQ9HAB8 311 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 RNPEPL1Q9HAU8 725 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 PIH1D1Q9NWS0 290 aaKnown RBP12.84□□□□□ -0.35
DDX39A-202ENST00000324340 DEC1Q9P2X7 70 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 RABGEF1Q9UJ41 708 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 SOX13Q9UN79 622 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 L3MBTL1Q9Y468 752 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 MAD1L1Q9Y6D9 718 aa12.84□□□□□ -0.35
DDX39A-202ENST00000324340 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.83□□□□□ -0.36
DDX39A-202ENST00000324340 FAM237BA0A1B0GVD1 139 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 TCRBV9S1A1TA0A576 114 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 TIMM44O43615 452 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 FZD6O60353 706 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 ALDH1A2O94788 518 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 UBOX5O94941 541 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 NDST3O95803 873 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 PRLP01236 227 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 C1QAP02745 245 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 FGF1P05230 155 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 ATP5BP06576 529 aaKnown RBP12.83□□□□□ -0.36
DDX39A-202ENST00000324340 DLDP09622 509 aaKnown RBP12.83□□□□□ -0.36
DDX39A-202ENST00000324340 KCNA5P22460 613 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 PRKCHP24723 683 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 STX2P32856 288 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 CHRNA4P43681 627 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 SLC6A11P48066 632 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 SNRPD1P62314 119 aaKnown RBP12.83□□□□□ -0.36
DDX39A-202ENST00000324340 CRADDP78560 199 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 LAMB3Q13751 1172 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 EIF4HQ15056 248 aaKnown RBP12.83□□□□□ -0.36
DDX39A-202ENST00000324340 PTPRNQ16849 979 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 ITPRIPL2Q3MIP1 535 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 PCID2Q5JVF3 399 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 SIRPB2Q5JXA9 342 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 ZNF449Q6P9G9 518 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 KDM1BQ8NB78 822 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 UHMK1Q8TAS1 419 aaKnown RBP12.83□□□□□ -0.36
DDX39A-202ENST00000324340 GSDMBQ8TAX9 411 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 IFT43Q96FT9 208 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 MYO19Q96H55 970 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 RPL10LQ96L21 214 aaKnown RBP12.83□□□□□ -0.36
DDX39A-202ENST00000324340 GUCD1Q96NT3 240 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 ELAC2Q9BQ52 826 aaKnown RBP12.83□□□□□ -0.36
DDX39A-202ENST00000324340 CCDC77Q9BR77 488 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 MRM3Q9HC36 420 aaKnown RBP12.83□□□□□ -0.36
DDX39A-202ENST00000324340 TRPV5Q9NQA5 729 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 GTSE1Q9NYZ3 720 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 MOCS1Q9NZB8 636 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 PRKAG3Q9UGI9 489 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 MYLKQ15746 1914 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 REV3LO60673 3130 aa12.83□□□□□ -0.36
DDX39A-202ENST00000324340 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.82□□□□□ -0.36
DDX39A-202ENST00000324340 RGS16O15492 202 aaPredicted RBP12.82□□□□□ -0.36
DDX39A-202ENST00000324340 USP1O94782 785 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 IGSF6O95976 241 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 POLBP06746 335 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 TPH1P17752 444 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 CA4P22748 312 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 ADRA1DP25100 572 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 TRAF2Q12933 501 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 RASA2Q15283 850 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 KLHL38Q2WGJ6 581 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 SPANXN3Q5MJ09 141 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 ATXN7L2Q5T6C5 722 aaPredicted RBP12.82□□□□□ -0.36
DDX39A-202ENST00000324340 THEMIS2Q5TEJ8 643 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 ANO7Q6IWH7 933 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 CASC4Q6P4E1 433 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 Q7L0L9 218 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 SPATA21Q7Z572 469 aa12.82□□□□□ -0.36
DDX39A-202ENST00000324340 RNF135Q8IUD6 432 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms