RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TIE1P35590 1138 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 ATP13A5Q4VNC0 1218 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 PTRHD1Q6GMV3 140 aaKnown RBP7.09□□□□□ -1.28
SMC1A-201ENST00000322213 ANKS3Q6ZW76 656 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 OFCC1Q8IZS5 231 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 DMRTB1Q96MA1 342 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 FAM193BQ96PV7 902 aaPredicted RBP7.09□□□□□ -1.28
SMC1A-201ENST00000322213 KLHL1Q9NR64 748 aa7.09□□□□□ -1.28
SMC1A-201ENST00000322213 H0YJX3 145 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 GSTM1P09488 218 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 ZNF806P0C7X5 589 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 THRBP10828 461 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 RASA1P20936 1047 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 IGFBP5P24593 272 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 FEN1P39748 380 aaKnown RBP7.08□□□□□ -1.28
SMC1A-201ENST00000322213 REP15Q6BDI9 236 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 ZFP28Q8NHY6 868 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 TAS1R2Q8TE23 839 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 SLC6A15Q9H2J7 730 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 TBC1D14Q9P2M4 693 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 TFPTP0C1Z6 253 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 LIN54Q6MZP7 749 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 ERAP2Q6P179 960 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 PTAR1Q7Z6K3 402 aaPredicted RBP7.08□□□□□ -1.28
SMC1A-201ENST00000322213 PIH1D2Q8WWB5 315 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 LRTOMTQ8WZ04 291 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 CEP295NLQ96MC4 621 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 RIOX1Q9H6W3 641 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 SYTL2Q9HCH5 934 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 DPP3Q9NY33 737 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 COMMD9Q9P000 198 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 A0A1W2PPM1 405 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 DNAJB5O75953 348 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 NCAM1P13591 858 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 FASTKD3Q14CZ7 662 aaKnown RBP7.08□□□□□ -1.28
SMC1A-201ENST00000322213 SLC2A7Q6PXP3 512 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 SEC14L1Q92503 715 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 APBA2Q99767 749 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 CNOT6Q9ULM6 557 aaKnown RBP7.08□□□□□ -1.28
SMC1A-201ENST00000322213 A0A0G2JPF8 293 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 HNRNPCL3B7ZW38 293 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 F8W810 466 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 FANCGO15287 622 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 HNRNPCL4P0DMR1 293 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 HOXB8P17481 243 aaPredicted RBP7.08□□□□□ -1.28
SMC1A-201ENST00000322213 LBPP18428 481 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 PPP2R1BP30154 601 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 GEMP55040 296 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 PFKFB4Q16877 469 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 CCDC185Q8N715 623 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 RNF149Q8NC42 400 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 BTN2A2Q8WVV5 523 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 TBL1YQ9BQ87 522 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 CDHR5Q9HBB8 845 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 TBC1D30Q9Y2I9 924 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 PCDHB12Q9Y5F1 795 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 ALS2Q96Q42 1657 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 CAMTA1Q9Y6Y1 1673 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 ZNF99A8MXY4 864 aaPredicted RBP7.08□□□□□ -1.28
SMC1A-201ENST00000322213 RGS14O43566 566 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 CD4P01730 458 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 C7P10643 843 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 ERP29P30040 261 aaKnown RBP7.08□□□□□ -1.28
SMC1A-201ENST00000322213 RPL22P35268 128 aaKnown RBP7.08□□□□□ -1.28
SMC1A-201ENST00000322213 NFE2L1Q14494 772 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 MED22Q15528 200 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 FSCN1Q16658 493 aaKnown RBP7.08□□□□□ -1.28
SMC1A-201ENST00000322213 SPESP1Q6UW49 350 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 PABPC5Q96DU9 382 aaKnown RBP7.08□□□□□ -1.28
SMC1A-201ENST00000322213 KAZALD1Q96I82 304 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 GFM1Q96RP9 751 aaKnown RBP7.08□□□□□ -1.28
SMC1A-201ENST00000322213 TRMOQ9BU70 441 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 SLC30A1Q9Y6M5 507 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 TMEM221A6NGB7 291 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 B8ZZF3 427 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 MAP3K6O95382 1288 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 GRIA2P42262 883 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 SLC15A1P46059 708 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 RORCP51449 518 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 XKR3Q5GH77 459 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 PLEKHG7Q6ZR37 379 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 ANKS1BQ7Z6G8 1248 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 SPERTQ8NA61 448 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 PIGBQ92521 554 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 AURKBQ96GD4 344 aaPredicted RBP7.08□□□□□ -1.28
SMC1A-201ENST00000322213 REXO5Q96IC2 774 aaKnown RBP7.08□□□□□ -1.28
SMC1A-201ENST00000322213 SAMD4AQ9UPU9 718 aaKnown RBP7.08□□□□□ -1.28
SMC1A-201ENST00000322213 SAMHD1Q9Y3Z3 626 aaKnown RBP7.08□□□□□ -1.28
SMC1A-201ENST00000322213 PSME4Q14997 1843 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 ITM2AO43736 263 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 LYPLA1O75608 230 aaPredicted RBP7.08□□□□□ -1.28
SMC1A-201ENST00000322213 SLC22A3O75751 556 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 SLC2A3P11169 496 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 FUT4P22083 530 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 ATP12AP54707 1039 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 ZNF45Q02386 682 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 BNIP3Q12983 259 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 MYLK3Q32MK0 819 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 TTLL9Q3SXZ7 439 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 ATF7IP2Q5U623 682 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms