RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 FRMPD4Q14CM0 1322 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 CASTOR2A6NHX0 329 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 MATN2O00339 956 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 OR10H2O60403 315 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 TKTL2Q9H0I9 626 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 E7ENX8 843 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 RFXANKO14593 260 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 KRT33AO76009 404 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 NUMBP49757 651 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 ARPC4P59998 168 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 ZNF662Q6ZS27 426 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 HELQQ8TDG4 1101 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 MCCC1Q96RQ3 725 aaPredicted RBP16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 GRIP1Q9Y3R0 1128 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 RBM7Q9Y580 266 aaKnown RBP16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 IQSEC2Q5JU85 1478 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 FAM172BPA6NC97 362 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 CATP04040 527 aaKnown RBP16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 TGFB3P10600 412 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 CTSKP43235 329 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 DNERQ8NFT8 737 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 C18orf25Q96B23 403 aaPredicted RBP16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 DIRAS2Q96HU8 199 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 MROH8Q9H579 483 aa16.93■□□□□ 0.3
SMCHD1-201ENST00000320876 CYP2C18P33260 490 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 GALK1P51570 392 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 PRR23BQ6ZRT6 265 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 ADCY4Q8NFM4 1077 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 PSMD13Q9UNM6 376 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 PCDHB12Q9Y5F1 795 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 URADA6NGE7 173 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 DNAJA2O60884 412 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 TRIM3O75382 744 aaPredicted RBP16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 C16orf46Q6P387 395 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 RCN3Q96D15 328 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 IFT80Q9P2H3 777 aaPredicted RBP16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 CYP1A2P05177 515 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 ARF4P18085 180 aaPredicted RBP16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 RPS12P25398 132 aaKnown RBP16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 RBL1P28749 1068 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 BST1Q10588 318 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 TMCO6Q96DC7 493 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 LRRC19Q9H756 370 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 NDOR1Q9UHB4 597 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 PCDHB5Q9Y5E4 795 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 CHD2O14647 1828 aaKnown RBP16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 PPP2R2BQ00005 443 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 NFIXQ14938 502 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 XKR6Q5GH73 641 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 PTGR2Q8N8N7 351 aaPredicted RBP16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 FAM98AQ8NCA5 519 aaKnown RBP16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 OR2T34Q8NGX1 318 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 OR2T3Q8NH03 318 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 CST11Q9H112 138 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 S100A14Q9HCY8 104 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 QSOX1O00391 747 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 CLHC1Q8NHS4 586 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 ZNF446Q9NWS9 450 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 STOX2Q9P2F5 926 aaPredicted RBP16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 NUP50Q9UKX7 468 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 AGRPO00253 132 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 REM1O75628 298 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 CCNB1P14635 433 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 EPHA3P29320 983 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 MAPK8P45983 427 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 RFTN2Q52LD8 501 aaPredicted RBP16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 ZNF613Q6PF04 617 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 TNS4Q8IZW8 715 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 SPAG16Q8N0X2 631 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 OR2L5Q8NG80 312 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 OR52K1Q8NGK4 314 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 RFT1Q96AA3 541 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 ZNF354BQ96LW1 612 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 TTLL2Q9BWV7 592 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 CDH19Q9H159 772 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 FFAR3O14843 346 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 GPR42O15529 346 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 FBXO33Q7Z6M2 555 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 HASPINQ8TF76 798 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 FBXO6Q9NRD1 293 aaPredicted RBP16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 ABCC13Q9NSE7 274 aa16.92■□□□□ 0.3
SMCHD1-201ENST00000320876 ITGA2BP08514 1039 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 CSH1P0DML2 217 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 CSH2P0DML3 217 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 ADAM32Q8TC27 787 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 ATG4CQ96DT6 458 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 ORC5O43913 435 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 PRLP01236 227 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 RAPSNQ13702 412 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 LRRC38Q5VT99 294 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 SLC2A14Q8TDB8 520 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 ELMO1Q92556 727 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 ZNF780BQ9Y6R6 833 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 HOXC6P09630 235 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 SLC12A3P55017 1021 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 IRF8Q02556 426 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 SLC34A3Q8N130 599 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 TTYH1Q9H313 450 aaPredicted RBP16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 ASB7Q9H672 318 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms