RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 DHRS4L2Q6PKH6 230 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 MYO1HQ8N1T3 1032 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 ACMSDQ8TDX5 336 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 ATP6V1E2Q96A05 226 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 GLOD4Q9HC38 313 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 CYP4F12Q9HCS2 524 aa15.64■□□□□ 0.09
SHROOM1-201ENST00000319854 NEMP2A6NFY4 417 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 MTSS1O43312 755 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 CAPNS1P04632 268 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 SLC10A3P09131 477 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 HAPLN1P10915 354 aaPredicted RBP15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 MYL4P12829 197 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 HCAR3P49019 387 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 AIF1P55008 147 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 GFM2Q969S9 779 aaKnown RBP15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 RCN3Q96D15 328 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 ELMO2Q96JJ3 720 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 FNDC3AQ9Y2H6 1198 aaKnown RBP15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 ZNF623O75123 536 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 ENO3P13929 434 aaPredicted RBP15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 HARS2P49590 506 aaKnown RBP15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 MBTPS1Q14703 1052 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 ZNF789Q5FWF6 425 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 PIK3R6Q5UE93 754 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 RAP1GAP2Q684P5 730 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 CYS1Q717R9 158 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 CEP97Q8IW35 865 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 SLC15A3Q8IY34 581 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 APBB2Q92870 758 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 SUSD3Q96L08 255 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 SLC29A1Q99808 456 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 GATA5Q9BWX5 397 aaPredicted RBP15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 ACE2Q9BYF1 805 aaPredicted RBP15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 MTF2Q9Y483 593 aaPredicted RBP15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 TMEM88BA6NKF7 163 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 ADAM23O75077 832 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 AOC2O75106 756 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 H6PDO95479 791 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 CPB1P15086 417 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 CD86P42081 329 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 SLC10A7Q0GE19 358 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 PTPRCAPQ14761 206 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 BNC2Q6ZN30 1099 aaPredicted RBP15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 CFAP52Q8N1V2 620 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 KYQ8NBH2 561 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 OR6P1Q8NGX9 317 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 GIPC2Q8TF65 315 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 TSNARE1Q96NA8 513 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 BIRC8Q96P09 236 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 CORO1BQ9BR76 489 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 NUF2Q9BZD4 464 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 CATSPERBQ9H7T0 1116 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 SELENONQ9NZV5 590 aa15.63■□□□□ 0.09
SHROOM1-201ENST00000319854 TMEM233B4DJY2 109 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 H3BNH8 94 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 M0QZQ0 153 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 CA12O43570 354 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 ARSAP15289 507 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 NPY2RP49146 381 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 PDAP1Q13442 181 aaKnown RBP15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 CTXN3Q4LDR2 81 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 C10orf120Q5SQS8 335 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 TMEM198Q66K66 360 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 ZC3HC1Q86WB0 502 aaKnown RBP15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 CROCCP3Q8IVE0 287 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 TDRD5Q8NAT2 981 aaKnown RBP15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 CATSPER1Q8NEC5 780 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 EME1Q96AY2 570 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 NXNL1Q96CM4 212 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 HMCESQ96FZ2 354 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 PKMYT1Q99640 499 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 CDC14AQ9UNH5 594 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 NEU3Q9UQ49 428 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 ACTL7AQ9Y615 435 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 ARHGEF37A1IGU5 675 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 OR51F1A6NGY5 319 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 G3V2L1 256 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 CKBP12277 381 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 GLDCP23378 1020 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 PRDX6P30041 224 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 DSC2Q02487 901 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 ADRM1Q16186 407 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 ZBTB46Q86UZ6 589 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 CLVS1Q8IUQ0 354 aaPredicted RBP15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 KLHDC9Q8NEP7 349 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 PSMG2Q969U7 264 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 PAIP1Q9H074 479 aaKnown RBP15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 TBC1D13Q9NVG8 400 aa15.62■□□□□ 0.09
SHROOM1-201ENST00000319854 TNFRSF10BO14763 440 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 MT-CO1P00395 513 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 FUCA1P04066 466 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 SLC1A2P43004 574 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 GRIA4P48058 902 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 WNT3AP56704 352 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 DSC3Q14574 896 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 FSCBQ5H9T9 825 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 GRAMD4Q6IC98 578 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 OGFOD2Q6N063 350 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 ZFP1Q6P2D0 407 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 MFSD6LQ8IWD5 586 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms