RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 SETD4Q9NVD3 440 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 SMPD3Q9NY59 655 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-202ENST00000318266 GNPTGQ9UJJ9 305 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 PTBP2Q9UKA9 531 aaKnown RBP9.7□□□□□ -0.86
PTPRA-202ENST00000318266 FZD10Q9ULW2 581 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 USP22Q9UPT9 525 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 MTF2Q9Y483 593 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-202ENST00000318266 TCAF1Q9Y4C2 921 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 MAGED1Q9Y5V3 778 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-202ENST00000318266 A0A087WZ62 844 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 A0A0J9YYE9 177 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 SNAP91O60641 907 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 RSL1D1O76021 490 aaKnown RBP9.7□□□□□ -0.86
PTPRA-202ENST00000318266 SUPT7LO94864 414 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 ESRRBO95718 433 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 MT-CYBP00156 380 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-202ENST00000318266 PCNAP12004 261 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 IL7RP16871 459 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 ERCC2P18074 760 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 RPS9P46781 194 aaKnown RBP9.7□□□□□ -0.86
PTPRA-202ENST00000318266 GLUD2P49448 558 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 RBP5P82980 135 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 MBTD1Q05BQ5 628 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 INCA1Q0VD86 236 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 CYBRD1Q53TN4 286 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 RABL3Q5HYI8 236 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 ESRP1Q6NXG1 681 aaKnown RBP9.7□□□□□ -0.86
PTPRA-202ENST00000318266 SLC26A9Q7LBE3 791 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 PIWIL4Q7Z3Z4 852 aaKnown RBP9.7□□□□□ -0.86
PTPRA-202ENST00000318266 NPWQ8N729 165 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 MFSD2AQ8NA29 543 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 TOP1MTQ969P6 601 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 FDXACB1Q9BRP7 624 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-202ENST00000318266 LHPPQ9H008 270 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 NUP205Q92621 2012 aa9.7□□□□□ -0.86
PTPRA-202ENST00000318266 SOBPA7XYQ1 873 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 ZBBXA8MT70 800 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 CLPXO76031 633 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 VTNP04004 478 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 LMO2P25791 158 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 CAPGP40121 348 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 ADIGQ0VDE8 80 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 GALNT2Q10471 571 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 FBXO48Q5FWF7 155 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 RBM20Q5T481 1227 aaKnown RBP9.69□□□□□ -0.86
PTPRA-202ENST00000318266 SYPL2Q5VXT5 272 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 ZNF470Q6ECI4 717 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 TBPL2Q6SJ96 375 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 CTU1Q7Z7A3 348 aaKnown RBP9.69□□□□□ -0.86
PTPRA-202ENST00000318266 ERO1BQ86YB8 467 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 RYBPQ8N488 228 aaPredicted RBP9.69□□□□□ -0.86
PTPRA-202ENST00000318266 SMG8Q8ND04 991 aaKnown RBP9.69□□□□□ -0.86
PTPRA-202ENST00000318266 IPMKQ8NFU5 416 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 SEPT1Q8WYJ6 367 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 CENPNQ96H22 339 aaPredicted RBP9.69□□□□□ -0.86
PTPRA-202ENST00000318266 GPR78Q96P69 363 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 C1orf50Q9BV19 199 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 C2orf40Q9H1Z8 148 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 FZD8Q9H461 694 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 NANOGQ9H9S0 305 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 CASS4Q9NQ75 786 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 ATAD3AQ9NVI7 634 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 ARMC1Q9NVT9 282 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 ANKRD6Q9Y2G4 727 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 COL2A1P02458 1487 aaPredicted RBP9.69□□□□□ -0.86
PTPRA-202ENST00000318266 MGAMO43451 1857 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 TRIM64CA6NLI5 447 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 ZBTB42B2RXF5 422 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 FZD9O00144 591 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 PPP6CO00743 305 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 ANGPT2O15123 496 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 ARPC2O15144 300 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 HUS1O60921 280 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 ALDOCP09972 364 aaKnown RBP9.69□□□□□ -0.86
PTPRA-202ENST00000318266 NDUFV1P49821 464 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 CCT8P50990 548 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 BCAT1P54687 386 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 SPCS2Q15005 226 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 PKDCCQ504Y2 493 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 INTS11Q5TA45 600 aaKnown RBP9.69□□□□□ -0.86
PTPRA-202ENST00000318266 ARHGAP17Q68EM7 881 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 CADM3Q8N126 398 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 SLC2A14Q8TDB8 520 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 TRUB1Q8WWH5 349 aaKnown RBP9.69□□□□□ -0.86
PTPRA-202ENST00000318266 DOK1Q99704 481 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 DNAI2Q9GZS0 605 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 RAD21L1Q9H4I0 556 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 RIC8BQ9NVN3 520 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 GIN1Q9NXP7 522 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 MAP10Q9P2G4 905 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 EVLQ9UI08 416 aaPredicted RBP9.69□□□□□ -0.86
PTPRA-202ENST00000318266 TNFSF13BQ9Y275 285 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 IGKV6D-21A0A0A0MT36 114 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 A8MT66 165 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 H3BMM5 538 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 ACOX3O15254 700 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 AQP9O43315 295 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 CAPN3P20807 821 aa9.69□□□□□ -0.86
PTPRA-202ENST00000318266 ATP5F1P24539 256 aaPredicted RBP9.69□□□□□ -0.86
PTPRA-202ENST00000318266 ATICP31939 592 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms