RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 MARC1Q5VT66 337 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 CDCP2Q5VXM1 449 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 LIPIQ6XZB0 460 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 LRRC69Q6ZNQ3 347 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 HID1Q8IV36 788 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 TP53INP2Q8IXH6 220 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 SPOCK2Q92563 424 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 NAT6Q93015 286 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 GRAMD1AQ96CP6 724 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 NUDCD1Q96RS6 583 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 LRRC61Q9BV99 259 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 BOCQ9BWV1 1114 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 TCEAL2Q9H3H9 227 aaPredicted RBP17.85■□□□□ 0.45
TPM1-203ENST00000317516 ETNK2Q9NVF9 386 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 ZNHIT6Q9NWK9 470 aaKnown RBP17.85■□□□□ 0.45
TPM1-203ENST00000317516 KCTD5Q9NXV2 234 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 U3KQA8 63 aa17.85■□□□□ 0.45
TPM1-203ENST00000317516 FREM2Q5SZK8 3169 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 CACNB4O00305 520 aaPredicted RBP17.84■□□□□ 0.45
TPM1-203ENST00000317516 YY2O15391 372 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 TNFP01375 233 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 PCCBP05166 539 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 H2AFZP0C0S5 128 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 KELP23276 732 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 HNRNPH3P31942 346 aaKnown RBP17.84■□□□□ 0.45
TPM1-203ENST00000317516 ACTN2P35609 894 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 SRP54P61011 504 aaKnown RBP17.84■□□□□ 0.45
TPM1-203ENST00000317516 TRIM14Q14142 442 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 COL28A1Q2UY09 1125 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 C6orf132Q5T0Z8 1188 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 TXNRD3NBQ6F5E7 133 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 H2AFVQ71UI9 128 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 DPPA4Q7L190 304 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 EFL1Q7Z2Z2 1120 aaKnown RBP17.84■□□□□ 0.45
TPM1-203ENST00000317516 RD3Q7Z3Z2 195 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 GKN2Q86XP6 184 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 MAP7D3Q8IWC1 876 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 LSMEM2Q8N112 164 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 OR8K1Q8NGG5 319 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 WDR48Q8TAF3 677 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 ZNF564Q8TBZ8 553 aaPredicted RBP17.84■□□□□ 0.45
TPM1-203ENST00000317516 PDCD6IPQ8WUM4 868 aaKnown RBP17.84■□□□□ 0.45
TPM1-203ENST00000317516 CTNNBL1Q8WYA6 563 aaPredicted RBP17.84■□□□□ 0.45
TPM1-203ENST00000317516 TSACCQ96A04 125 aaPredicted RBP17.84■□□□□ 0.45
TPM1-203ENST00000317516 WDR92Q96MX6 357 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 DCBLD2Q96PD2 775 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 XPO4Q9C0E2 1151 aaKnown RBP17.84■□□□□ 0.45
TPM1-203ENST00000317516 HAUS2Q9NVX0 235 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 CTTNBP2NLQ9P2B4 639 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 UVRAGQ9P2Y5 699 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 KLQ9UEF7 1012 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 OR1A2Q9Y585 309 aa17.84■□□□□ 0.45
TPM1-203ENST00000317516 TP53BP1Q12888 1972 aaPredicted RBP17.83■□□□□ 0.44
TPM1-203ENST00000317516 PDE2AO00408 941 aaPredicted RBP17.83■□□□□ 0.44
TPM1-203ENST00000317516 HTRA2O43464 458 aaPredicted RBP17.83■□□□□ 0.44
TPM1-203ENST00000317516 TPM1P09493 284 aa17.83■□□□□ 0.44
TPM1-203ENST00000317516 KRT10P13645 584 aa17.83■□□□□ 0.44
TPM1-203ENST00000317516 MMP13P45452 471 aa17.83■□□□□ 0.44
TPM1-203ENST00000317516 RALGDSQ12967 914 aa17.83■□□□□ 0.44
TPM1-203ENST00000317516 ACOX1Q15067 660 aa17.83■□□□□ 0.44
TPM1-203ENST00000317516 ALG11Q2TAA5 492 aa17.83■□□□□ 0.44
TPM1-203ENST00000317516 GUSBP11Q6P575 273 aa17.83■□□□□ 0.44
TPM1-203ENST00000317516 NDUFAF2Q8N183 169 aa17.83■□□□□ 0.44
TPM1-203ENST00000317516 KCTD6Q8NC69 237 aa17.83■□□□□ 0.44
TPM1-203ENST00000317516 FGF11Q92914 225 aa17.83■□□□□ 0.44
TPM1-203ENST00000317516 MGME1Q9BQP7 344 aa17.83■□□□□ 0.44
TPM1-203ENST00000317516 CLPBQ9H078 707 aa17.83■□□□□ 0.44
TPM1-203ENST00000317516 DEF6Q9H4E7 631 aa17.83■□□□□ 0.44
TPM1-203ENST00000317516 NOD2Q9HC29 1040 aa17.83■□□□□ 0.44
TPM1-203ENST00000317516 PNMA8BQ9ULN7 279 aaPredicted RBP17.83■□□□□ 0.44
TPM1-203ENST00000317516 PADI4Q9UM07 663 aa17.83■□□□□ 0.44
TPM1-203ENST00000317516 PHTF1Q9UMS5 762 aa17.83■□□□□ 0.44
TPM1-203ENST00000317516 PCDHGC4Q9Y5F7 938 aa17.83■□□□□ 0.44
TPM1-203ENST00000317516 CSO75390 466 aaKnown RBP17.82■□□□□ 0.44
TPM1-203ENST00000317516 PEX11BO96011 259 aa17.82■□□□□ 0.44
TPM1-203ENST00000317516 KRT7P08729 469 aa17.82■□□□□ 0.44
TPM1-203ENST00000317516 HOXC4P09017 264 aaPredicted RBP17.82■□□□□ 0.44
TPM1-203ENST00000317516 CYP2A6P11509 494 aaPredicted RBP17.82■□□□□ 0.44
TPM1-203ENST00000317516 CR2P20023 1033 aa17.82■□□□□ 0.44
TPM1-203ENST00000317516 IL4RP24394 825 aa17.82■□□□□ 0.44
TPM1-203ENST00000317516 PDK2Q15119 407 aa17.82■□□□□ 0.44
TPM1-203ENST00000317516 SLC18A3Q16572 532 aa17.82■□□□□ 0.44
TPM1-203ENST00000317516 SPECC1LQ69YQ0 1117 aa17.82■□□□□ 0.44
TPM1-203ENST00000317516 SLC35F3Q8IY50 421 aa17.82■□□□□ 0.44
TPM1-203ENST00000317516 OR56A4Q8NGH8 313 aa17.82■□□□□ 0.44
TPM1-203ENST00000317516 FAM71BQ8TC56 605 aa17.82■□□□□ 0.44
TPM1-203ENST00000317516 GULP1Q9UBP9 304 aa17.82■□□□□ 0.44
TPM1-203ENST00000317516 DGKBQ9Y6T7 804 aa17.82■□□□□ 0.44
TPM1-203ENST00000317516 ZFHX4Q86UP3 3567 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 TTC24A2A3L6 582 aaPredicted RBP17.81■□□□□ 0.44
TPM1-203ENST00000317516 A8MX80 341 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 TNFRSF10CO14798 259 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 BRINP1O60477 761 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 USP12O75317 370 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 TCEA3O75764 348 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 PROSCO94903 275 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 CPP00450 1065 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 CES1P23141 567 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 TRIM23P36406 574 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 EIF2S3P41091 472 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms