RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 MARK4Q96L34 752 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 SPATA9Q9BWV2 254 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 SIK2Q9H0K1 926 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 LHX5Q9H2C1 402 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 MAGED2Q9UNF1 606 aaPredicted RBP4.53□□□□□ -1.68
CNOT1-201ENST00000317147 KCNH4Q9UQ05 1017 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.53□□□□□ -1.68
CNOT1-201ENST00000317147 TRAF6Q9Y4K3 522 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 BOD1L1Q8NFC6 3051 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 PIAS1O75925 651 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 TDP2O95551 362 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 CRTAMO95727 393 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 PKLRP30613 574 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 CPA2P48052 419 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 PSMD4P55036 377 aaKnown RBP4.53□□□□□ -1.68
CNOT1-201ENST00000317147 DPYSL3Q14195 570 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 INTS6LQ5JSJ4 861 aaKnown RBP4.53□□□□□ -1.68
CNOT1-201ENST00000317147 FAM43BQ6ZT52 329 aaPredicted RBP4.53□□□□□ -1.68
CNOT1-201ENST00000317147 FRMD7Q6ZUT3 714 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 APTXQ7Z2E3 356 aaKnown RBP4.53□□□□□ -1.68
CNOT1-201ENST00000317147 FAM126BQ8IXS8 530 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 NKAPQ8N5F7 415 aaKnown RBP4.53□□□□□ -1.68
CNOT1-201ENST00000317147 UBE2E3Q969T4 207 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 IFT43Q96FT9 208 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 FEM1CQ96JP0 617 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 ACE2Q9BYF1 805 aaPredicted RBP4.53□□□□□ -1.68
CNOT1-201ENST00000317147 CD93Q9NPY3 652 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 THUMPD1Q9NXG2 353 aaKnown RBP4.53□□□□□ -1.68
CNOT1-201ENST00000317147 SLC39A10Q9ULF5 831 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 ERVW-1Q9UQF0 538 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 STON1Q9Y6Q2 735 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 ASPMQ8IZT6 3477 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 ATMINO43313 823 aaPredicted RBP4.53□□□□□ -1.68
CNOT1-201ENST00000317147 PROM1O43490 865 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 NOL4O94818 638 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 GSTM2P28161 218 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 RBL1P28749 1068 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 POLD3Q15054 466 aaPredicted RBP4.53□□□□□ -1.68
CNOT1-201ENST00000317147 TRAM1Q15629 374 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 IL17AQ16552 155 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 RBBP7Q16576 425 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 RNASEH2BQ5TBB1 312 aaKnown RBP4.53□□□□□ -1.68
CNOT1-201ENST00000317147 IL23RQ5VWK5 629 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 C16orf46Q6P387 395 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 METTL3Q86U44 580 aaKnown RBP4.53□□□□□ -1.68
CNOT1-201ENST00000317147 KCNMB4Q86W47 210 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 DSELQ8IZU8 1212 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 UBR7Q8N806 425 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 DNAJA4Q8WW22 397 aaPredicted RBP4.53□□□□□ -1.68
CNOT1-201ENST00000317147 DPF3Q92784 378 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 MTMR9Q96QG7 549 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 CAMKK2Q96RR4 588 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 ZCWPW1Q9H0M4 648 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 MED28Q9H204 178 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 GPN2Q9H9Y4 310 aaPredicted RBP4.53□□□□□ -1.68
CNOT1-201ENST00000317147 LRRC4CQ9HCJ2 640 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 MAT2BQ9NZL9 334 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 CDH7Q9ULB5 785 aa4.53□□□□□ -1.68
CNOT1-201ENST00000317147 SETD2Q9BYW2 2564 aaPredicted RBP4.53□□□□□ -1.68
CNOT1-201ENST00000317147 A0A1W2PQ72 361 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 ZNF99A8MXY4 864 aaPredicted RBP4.53□□□□□ -1.69
CNOT1-201ENST00000317147 WWP2O00308 870 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 EPHB6O15197 1021 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 NUAK1O60285 661 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 NRP2O60462 931 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 NPM3O75607 178 aaKnown RBP4.53□□□□□ -1.69
CNOT1-201ENST00000317147 SNX4O95219 450 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 HIST1H2AGP0C0S8 130 aaPredicted RBP4.53□□□□□ -1.69
CNOT1-201ENST00000317147 PTPN2P17706 415 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 HIST1H2ADP20671 130 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 CD72P21854 359 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 SSTR3P32745 418 aaPredicted RBP4.53□□□□□ -1.69
CNOT1-201ENST00000317147 PIK3CBP42338 1070 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 ZNF143P52747 638 aaPredicted RBP4.53□□□□□ -1.69
CNOT1-201ENST00000317147 IL5RAQ01344 420 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 POU5F1BQ06416 359 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 LGALS3BPQ08380 585 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 TEAD4Q15561 434 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 NDUFAF6Q330K2 333 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 PPM1LQ5SGD2 360 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 BHLHB9Q6PI77 547 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 ZNF517Q6ZMY9 492 aaPredicted RBP4.53□□□□□ -1.69
CNOT1-201ENST00000317147 ITIH5Q86UX2 942 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 NATD1Q8N6N6 113 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 HTR3CQ8WXA8 447 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 TCEAL3Q969E4 200 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 HIST1H2AHQ96KK5 128 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 TEFMQ96QE5 360 aaKnown RBP4.53□□□□□ -1.69
CNOT1-201ENST00000317147 HIST1H2AJQ99878 128 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 H2AFJQ9BTM1 129 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 KCTD10Q9H3F6 313 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 ANKRA2Q9H9E1 313 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 ENTPD7Q9NQZ7 604 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 UPB1Q9UBR1 384 aa4.53□□□□□ -1.69
CNOT1-201ENST00000317147 RBBP6Q7Z6E9 1792 aaKnown RBP4.52□□□□□ -1.69
CNOT1-201ENST00000317147 A0A096LPK6 155 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 CAPN8A6NHC0 703 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 H7C2Y5 167 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 SMIM22K7EJ46 135 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 CDC40O60508 579 aaKnown RBP eCLIP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms