RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 UBTFL1P0CB47 393 aaPredicted RBP4.22□□□□□ -1.73
SMCO3-201ENST00000316048 TSPY3P0CV98 308 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 TSPY8P0CW00 308 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 MCM3P25205 808 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 UBA7P41226 1012 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 TSPY1Q01534 308 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 GRIK3Q13003 919 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 ZNF362Q5T0B9 420 aaPredicted RBP4.22□□□□□ -1.73
SMCO3-201ENST00000316048 CHST9Q7L1S5 443 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 PRRT2Q7Z6L0 340 aaPredicted RBP4.22□□□□□ -1.73
SMCO3-201ENST00000316048 WDR5BQ86VZ2 330 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 LINC00346Q8IVM7 164 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 RASSF8Q8NHQ8 419 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 FAR1Q8WVX9 515 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 DNAAF4Q8WXU2 420 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 ATOH1Q92858 354 aaPredicted RBP4.22□□□□□ -1.73
SMCO3-201ENST00000316048 ARHGEF2Q92974 986 aaKnown RBP4.22□□□□□ -1.73
SMCO3-201ENST00000316048 GTF3C6Q969F1 213 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 MMABQ96EY8 250 aaPredicted RBP4.22□□□□□ -1.73
SMCO3-201ENST00000316048 ZNF747Q9BV97 191 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 FBRSL1Q9HCM7 1045 aaKnown RBP4.22□□□□□ -1.73
SMCO3-201ENST00000316048 PDE7BQ9NP56 450 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 GRHL1Q9NZI5 618 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 EHD2Q9NZN4 543 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 NCKIPSDQ9NZQ3 722 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 GIMAP2Q9UG22 337 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 SLC8A2Q9UPR5 921 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 TNFSF13BQ9Y275 285 aa4.22□□□□□ -1.73
SMCO3-201ENST00000316048 FAM208AQ9UK61 1670 aaKnown RBP4.22□□□□□ -1.73
SMCO3-201ENST00000316048 A8MV72 311 aaPredicted RBP4.21□□□□□ -1.74
SMCO3-201ENST00000316048 ERVV-2B6SEH9 535 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 POC1B-GALNT4F8VUJ3 575 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 WNT1P04628 370 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 PSMB10P40306 273 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 EIF2DP41214 584 aaKnown RBP4.21□□□□□ -1.74
SMCO3-201ENST00000316048 CDH8P55286 799 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 SLC18A2Q05940 514 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 LRMPQ12912 555 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 STK4Q13043 487 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 RNPS1Q15287 305 aaKnown RBP4.21□□□□□ -1.74
SMCO3-201ENST00000316048 TAF11Q15544 211 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 SPECC1Q5M775 1068 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 AKNAD1Q5T1N1 836 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 TXNDC8Q6A555 127 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 SLC30A6Q6NXT4 461 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 TSSK4Q6SA08 328 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 KIAA2013Q8IYS2 634 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 TAGAPQ8N103 731 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 CADM3Q8N126 398 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 SCML4Q8N228 414 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 PI4KAP1Q8N8J0 262 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 C11orf65Q8NCR3 313 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 IGFBPL1Q8WX77 278 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 SMARCE1Q969G3 411 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 SRSF8Q9BRL6 282 aaKnown RBP4.21□□□□□ -1.74
SMCO3-201ENST00000316048 TKTL2Q9H0I9 626 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 KAT14Q9H8E8 782 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 SLC6A13Q9NSD5 602 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 A4GNTQ9UNA3 340 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 PCDHGB5Q9Y5G0 923 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 CLDN16Q9Y5I7 305 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 HEG1Q9ULI3 1381 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 PXDNLA1KZ92 1463 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 COL18A1P39060 1754 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 AOX1Q06278 1338 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 PCDH11XQ9BZA7 1347 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 PCDH11YQ9BZA8 1340 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 ARHGEF17Q96PE2 2063 aaPredicted RBP4.21□□□□□ -1.74
SMCO3-201ENST00000316048 KDM3BQ7LBC6 1761 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 ARHGAP10A1A4S6 786 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 MYO1GB0I1T2 1018 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 NPIPB11E5RHQ5 1161 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 HEXAP06865 529 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 SLC2A4P14672 509 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 IL7RP16871 459 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 TNFRSF1AP19438 455 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 TACR3P29371 465 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 ARL1P40616 181 aaPredicted RBP4.21□□□□□ -1.74
SMCO3-201ENST00000316048 PIP4K2AP48426 406 aaPredicted RBP4.21□□□□□ -1.74
SMCO3-201ENST00000316048 GNAQP50148 359 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 BLKP51451 505 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 F2RL1P55085 397 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 HDAC4P56524 1084 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 RUNX2Q13950 521 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 FGFBP1Q14512 234 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 BEND3Q5T5X7 828 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 PRAMEF17Q5VTA0 474 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 KIAA0930Q6ICG6 404 aaPredicted RBP4.21□□□□□ -1.74
SMCO3-201ENST00000316048 CASC1Q6TDU7 716 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 GRASPQ7Z6J2 395 aaPredicted RBP4.21□□□□□ -1.74
SMCO3-201ENST00000316048 NOXA1Q86UR1 476 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 KRTAP19-1Q8IUB9 90 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 ARHGAP12Q8IWW6 846 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 C16orf71Q8IYS4 520 aaPredicted RBP4.21□□□□□ -1.74
SMCO3-201ENST00000316048 CNPY4Q8N129 248 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 CMASQ8NFW8 434 aaPredicted RBP4.21□□□□□ -1.74
SMCO3-201ENST00000316048 ZNF419Q96HQ0 510 aaPredicted RBP4.21□□□□□ -1.74
SMCO3-201ENST00000316048 C1orf74Q96LT6 269 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 UROC1Q96N76 676 aa4.21□□□□□ -1.74
SMCO3-201ENST00000316048 FRG2BQ96QU4 278 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms