RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ARHGAP24Q8N264 748 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 WFDC5Q8TCV5 224 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 ZNF398Q8TD17 642 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 ALKBH8Q96BT7 664 aaKnown RBP7.66□□□□□ -1.18
TRIM55-202ENST00000315962 RPL10LQ96L21 214 aaKnown RBP7.66□□□□□ -1.18
TRIM55-202ENST00000315962 IL12RB2Q99665 862 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 FRMD8Q9BZ67 464 aaPredicted RBP7.66□□□□□ -1.18
TRIM55-202ENST00000315962 GRIP2Q9C0E4 1043 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 BPIFA1Q9NP55 256 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 MRPL17Q9NRX2 175 aaKnown RBP7.66□□□□□ -1.18
TRIM55-202ENST00000315962 TRPM5Q9NZQ8 1165 aa7.66□□□□□ -1.18
TRIM55-202ENST00000315962 AAR2Q9Y312 384 aaKnown RBP7.66□□□□□ -1.18
TRIM55-202ENST00000315962 A0A096LPK6 155 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 TGM5O43548 720 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 C1RP00736 705 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 CPOXP36551 454 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 PLK1P53350 603 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 COG7P83436 770 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 ZNF235Q14590 738 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 USP10Q14694 798 aaKnown RBP7.65□□□□□ -1.18
TRIM55-202ENST00000315962 KRT72Q14CN4 511 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 CNSTQ6PJW8 725 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 CEP97Q8IW35 865 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 ARHGAP18Q8N392 663 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 ZNF513Q8N8E2 541 aaPredicted RBP7.65□□□□□ -1.18
TRIM55-202ENST00000315962 RMDN1Q96DB5 314 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 MPP4Q96JB8 637 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 VPS39Q96JC1 886 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 C1orf74Q96LT6 269 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 CNBD2Q96M20 576 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 ANKRD27Q96NW4 1050 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 CORO1BQ9BR76 489 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 IL22Q9GZX6 179 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 C11orf49Q9H6J7 331 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 WDR55Q9H6Y2 383 aaPredicted RBP7.65□□□□□ -1.18
TRIM55-202ENST00000315962 S100A14Q9HCY8 104 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 ATP13A1Q9HD20 1204 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 SAGE1Q9NXZ1 904 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 EMCNQ9ULC0 261 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 FIS1Q9Y3D6 152 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 MUC3AQ02505 3323 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 FAM92AA1XBS5 289 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 H0Y626 953 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 MTSS1O43312 755 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 ACSL4O60488 711 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 SIN3BO75182 1162 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 ANXA9O76027 345 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 CXCL14O95715 111 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 BPGMP07738 259 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 MMP2P08253 660 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 MYL4P12829 197 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 SLC1A2P43004 574 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 ERVFC1P60507 584 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 MRPS22P82650 360 aaKnown RBP7.65□□□□□ -1.18
TRIM55-202ENST00000315962 SERINC3Q13530 473 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 TRMT5Q32P41 509 aaKnown RBP7.65□□□□□ -1.18
TRIM55-202ENST00000315962 SIRPB2Q5JXA9 342 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 RBM20Q5T481 1227 aaKnown RBP7.65□□□□□ -1.18
TRIM55-202ENST00000315962 ATXN7L2Q5T6C5 722 aaPredicted RBP7.65□□□□□ -1.18
TRIM55-202ENST00000315962 PLPP4Q5VZY2 271 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 RNF219Q5W0B1 726 aaPredicted RBP7.65□□□□□ -1.18
TRIM55-202ENST00000315962 RANBP10Q6VN20 620 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 GAREM2Q75VX8 874 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 ARHGAP22Q7Z5H3 698 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 NET1Q7Z628 596 aaPredicted RBP7.65□□□□□ -1.18
TRIM55-202ENST00000315962 ZBTB46Q86UZ6 589 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 SPATA24Q86W54 205 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 SLC39A11Q8N1S5 342 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 SCML4Q8N228 414 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 UMODL1-AS1Q8N2C9 162 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 OR13C4Q8NGS5 318 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 HDAC10Q969S8 669 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 FAM210AQ96ND0 272 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 FCRL5Q96RD9 977 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 VAT1Q99536 393 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 EIF2B3Q9NR50 452 aaKnown RBP7.65□□□□□ -1.18
TRIM55-202ENST00000315962 TMEM248Q9NWD8 314 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 KCNK4Q9NYG8 393 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 SPG21Q9NZD8 308 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 IL37Q9NZH6 218 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 SOX13Q9UN79 622 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 CCL26Q9Y258 94 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 FCF1Q9Y324 198 aaKnown RBP7.65□□□□□ -1.18
TRIM55-202ENST00000315962 HCFC2Q9Y5Z7 792 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 CPQQ9Y646 472 aa7.65□□□□□ -1.18
TRIM55-202ENST00000315962 COL6A3P12111 3177 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 NEMP2A6NFY4 417 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 ZBTB14O43829 449 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 TBL1XO60907 577 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 TIMP1P01033 207 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 C2P06681 752 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 RPL10P27635 214 aaKnown RBP7.65□□□□□ -1.19
TRIM55-202ENST00000315962 GP5P40197 560 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 SLC1A6P48664 564 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 SLC11A2P49281 568 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 RAP1GDS1P52306 607 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 GNA12Q03113 381 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 MTA1Q13330 715 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 MED21Q13503 144 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 LRRC73Q5JTD7 316 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms