RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 GLP2RO95838 553 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 CKMP06732 381 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 C8AP07357 584 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 CES1P23141 567 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 TUBB3Q13509 450 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 LIPMQ5VYY2 423 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 FAM91A1Q658Y4 838 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 ZNF781Q8N8C0 355 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 ZBED2Q9BTP6 218 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 TUBB6Q9BUF5 446 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 IGSF5Q9NSI5 407 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 CXXC1Q9P0U4 656 aaPredicted RBP18.43■□□□□ 0.54
CCDC43-201ENST00000315286 CRYL1Q9Y2S2 319 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 VWA7Q9Y334 891 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 RAI2Q9Y5P3 530 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 PDE4DIPQ5VU43 2346 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 TYW5A2RUC4 315 aaKnown RBP18.43■□□□□ 0.54
CCDC43-201ENST00000315286 DLX3O60479 287 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 H2AFYO75367 372 aaKnown RBP18.43■□□□□ 0.54
CCDC43-201ENST00000315286 FGBP02675 491 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 PTPN4P29074 926 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 CSKP41240 450 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 GRIA4P48058 902 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 USP4Q13107 963 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 CSHL1Q14406 222 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 SEMA3AQ14563 771 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 TSNAXIP1Q2TAA8 658 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 FAM217AQ8IXS0 508 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 MDGA1Q8NFP4 955 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 CLP1Q92989 425 aaKnown RBP18.43■□□□□ 0.54
CCDC43-201ENST00000315286 ALG14Q96F25 216 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 CDKN2AIPNLQ96HQ2 116 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 TBC1D10AQ9BXI6 508 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 RIMKLBQ9ULI2 386 aa18.43■□□□□ 0.54
CCDC43-201ENST00000315286 A0A1W2PRU2 124 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 CAPN14A8MX76 684 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 CCDC22O60826 627 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 CRTAMO95727 393 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 ALOX15P16050 662 aaPredicted RBP18.42■□□□□ 0.54
CCDC43-201ENST00000315286 IDH3AP50213 366 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 ALDH18A1P54886 795 aaKnown RBP18.42■□□□□ 0.54
CCDC43-201ENST00000315286 CDKN2DP55273 166 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 NSUN2Q08J23 767 aaKnown RBP eCLIP18.42■□□□□ 0.54
CCDC43-201ENST00000315286 CDH18Q13634 790 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 TREML1Q86YW5 311 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 KREMEN2Q8NCW0 462 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 LPCAT1Q8NF37 534 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 GPR150Q8NGU9 434 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 OR4L1Q8NH43 312 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 RAB3IPQ96QF0 476 aaPredicted RBP18.42■□□□□ 0.54
CCDC43-201ENST00000315286 MRPL46Q9H2W6 279 aaKnown RBP18.42■□□□□ 0.54
CCDC43-201ENST00000315286 CFAP97Q9P2B7 532 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 LHX3Q9UBR4 397 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 VPS51Q9UID3 782 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 A8MUI8 341 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 HNRNPCL1O60812 293 aaKnown RBP18.42■□□□□ 0.54
CCDC43-201ENST00000315286 ADH1AP07327 375 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 CHRNGP07510 517 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 ZNF140P52738 457 aaPredicted RBP18.42■□□□□ 0.54
CCDC43-201ENST00000315286 NAGLUP54802 743 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 ERVFC1P60507 584 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 SLC7A9P82251 487 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 INO80DQ53TQ3 878 aaPredicted RBP18.42■□□□□ 0.54
CCDC43-201ENST00000315286 VWA5B1Q5TIE3 1220 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 CCDC149Q6ZUS6 474 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 BBS7Q8IWZ6 715 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 TTC8Q8TAM2 541 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 SH3RF2Q8TEC5 729 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 DDI1Q8WTU0 396 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 TSPAN17Q96FV3 270 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 MRPL57Q9BQC6 102 aaKnown RBP18.42■□□□□ 0.54
CCDC43-201ENST00000315286 DRC3Q9H069 523 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 STN1Q9H668 368 aaKnown RBP18.42■□□□□ 0.54
CCDC43-201ENST00000315286 GPAMQ9HCL2 828 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 NLE1Q9NVX2 485 aaPredicted RBP18.42■□□□□ 0.54
CCDC43-201ENST00000315286 LSM7Q9UK45 103 aaKnown RBP18.42■□□□□ 0.54
CCDC43-201ENST00000315286 FCF1Q9Y324 198 aaKnown RBP18.42■□□□□ 0.54
CCDC43-201ENST00000315286 INSL6Q9Y581 213 aa18.42■□□□□ 0.54
CCDC43-201ENST00000315286 ATP6V1G2O95670 118 aa18.41■□□□□ 0.54
CCDC43-201ENST00000315286 MT-CO1P00395 513 aa18.41■□□□□ 0.54
CCDC43-201ENST00000315286 ATP5BP06576 529 aaKnown RBP18.41■□□□□ 0.54
CCDC43-201ENST00000315286 SERPINA6P08185 405 aa18.41■□□□□ 0.54
CCDC43-201ENST00000315286 SLC8A1P32418 973 aa18.41■□□□□ 0.54
CCDC43-201ENST00000315286 CCR10P46092 362 aa18.41■□□□□ 0.54
CCDC43-201ENST00000315286 TRAF2Q12933 501 aa18.41■□□□□ 0.54
CCDC43-201ENST00000315286 MRNIPQ6NTE8 343 aa18.41■□□□□ 0.54
CCDC43-201ENST00000315286 ZNF549Q6P9A3 640 aa18.41■□□□□ 0.54
CCDC43-201ENST00000315286 NCEH1Q6PIU2 408 aa18.41■□□□□ 0.54
CCDC43-201ENST00000315286 HTR3DQ70Z44 454 aa18.41■□□□□ 0.54
CCDC43-201ENST00000315286 GLT6D1Q7Z4J2 308 aa18.41■□□□□ 0.54
CCDC43-201ENST00000315286 APCDD1Q8J025 514 aa18.41■□□□□ 0.54
CCDC43-201ENST00000315286 OR4K2Q8NGD2 314 aa18.41■□□□□ 0.54
CCDC43-201ENST00000315286 SLC22A17Q8WUG5 538 aa18.41■□□□□ 0.54
CCDC43-201ENST00000315286 ANKRD49Q8WVL7 239 aa18.41■□□□□ 0.54
CCDC43-201ENST00000315286 SGF29Q96ES7 293 aa18.41■□□□□ 0.54
CCDC43-201ENST00000315286 TCF25Q9BQ70 676 aa18.41■□□□□ 0.54
CCDC43-201ENST00000315286 CATSPERZQ9NTU4 200 aa18.41■□□□□ 0.54
CCDC43-201ENST00000315286 DNAJC28Q9NX36 388 aa18.41■□□□□ 0.54
CCDC43-201ENST00000315286 DNMT3BQ9UBC3 853 aaKnown RBP18.41■□□□□ 0.54
CCDC43-201ENST00000315286 SH3BP1Q9Y3L3 701 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms