RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 TLE3Q04726 772 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 NSUN2Q08J23 767 aaKnown RBP eCLIP8.21□□□□□ -1.1
TPM3-203ENST00000312970 INPP5AQ14642 412 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 AGERQ15109 404 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 ELOCQ15369 112 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 OCLNQ16625 522 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 WSCD2Q2TBF2 565 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 CFAP58Q5T655 872 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 PLEKHA7Q6IQ23 1121 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 ESRP1Q6NXG1 681 aaKnown RBP8.21□□□□□ -1.1
TPM3-203ENST00000312970 ERAP2Q6P179 960 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 BRAT1Q6PJG6 821 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 LVRNQ6Q4G3 990 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 PCSK4Q6UW60 755 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 RBM44Q6ZP01 1051 aaKnown RBP8.21□□□□□ -1.1
TPM3-203ENST00000312970 SRLQ86TD4 932 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 RETREG3Q86VR2 466 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 LURAP1LQ8IV03 231 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 SPACA3Q8IXA5 215 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 SDR16C5Q8N3Y7 309 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 FSTL5Q8N475 847 aaPredicted RBP8.21□□□□□ -1.1
TPM3-203ENST00000312970 LSM14AQ8ND56 463 aaKnown RBP8.21□□□□□ -1.1
TPM3-203ENST00000312970 WDR48Q8TAF3 677 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 NAT6Q93015 286 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 HIC2Q96JB3 615 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 EXOC2Q96KP1 924 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 FCRL3Q96P31 734 aaPredicted RBP8.21□□□□□ -1.1
TPM3-203ENST00000312970 TUBGCP5Q96RT8 1024 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 SYT11Q9BT88 431 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 APOOQ9BUR5 198 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 DPH1Q9BZG8 443 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 SLC39A8Q9C0K1 460 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 CLPBQ9H078 707 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 NAT10Q9H0A0 1025 aaKnown RBP8.21□□□□□ -1.1
TPM3-203ENST00000312970 DHX35Q9H5Z1 703 aaKnown RBP8.21□□□□□ -1.1
TPM3-203ENST00000312970 PDFQ9HBH1 243 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 PCDH12Q9NPG4 1184 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 TAS2R14Q9NYV8 317 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 PNMA8BQ9ULN7 279 aaPredicted RBP8.21□□□□□ -1.1
TPM3-203ENST00000312970 PADI4Q9UM07 663 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 AP4E1Q9UPM8 1137 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 DOLKQ9UPQ8 538 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 COQ6Q9Y2Z9 468 aa8.21□□□□□ -1.1
TPM3-203ENST00000312970 TEX51A0A1B0GUA7 166 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 TSPAN11A1L157 253 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 CFAP69A5D8W1 941 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 TMEM191CA6NGB0 347 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 SMTNL1A8MU46 457 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 TEX33O43247 280 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 RASGRP1O95267 797 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 TNFP01375 233 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 FTLP02792 175 aaPredicted RBP8.2□□□□□ -1.1
TPM3-203ENST00000312970 GZMAP12544 262 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 ATP1A3P13637 1013 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 C6P13671 934 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 ERCC2P18074 760 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 RBMS1P29558 406 aaKnown RBP8.2□□□□□ -1.1
TPM3-203ENST00000312970 SERPINA4P29622 427 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 DNAJA1P31689 397 aaKnown RBP8.2□□□□□ -1.1
TPM3-203ENST00000312970 HCAR3P49019 387 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 ZNF135P52742 658 aaPredicted RBP8.2□□□□□ -1.1
TPM3-203ENST00000312970 UCNP55089 124 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 SRP54P61011 504 aaKnown RBP8.2□□□□□ -1.1
TPM3-203ENST00000312970 POLR2LP62875 67 aaKnown RBP8.2□□□□□ -1.1
TPM3-203ENST00000312970 CXADRP78310 365 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 NFATC4Q14934 902 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 IRF4Q15306 451 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 FILIP1LQ4L180 1135 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 PERM1Q5SV97 790 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 CCDC183Q5T5S1 534 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 BROXQ5VW32 411 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 IGF2-ASQ6U949 168 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 ENPP7Q6UWV6 458 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 RD3Q7Z3Z2 195 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 GKN2Q86XP6 184 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 CAMK1DQ8IU85 385 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 HID1Q8IV36 788 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 PSTKQ8IV42 348 aaKnown RBP8.2□□□□□ -1.1
TPM3-203ENST00000312970 SLC35F3Q8IY50 421 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 AOPEPQ8N6M6 819 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 ARFGAP1Q8N6T3 406 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 TSEN2Q8NCE0 465 aaKnown RBP8.2□□□□□ -1.1
TPM3-203ENST00000312970 ATL2Q8NHH9 583 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 TSACCQ96A04 125 aaPredicted RBP8.2□□□□□ -1.1
TPM3-203ENST00000312970 ATXN7L3BQ96GX2 97 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 NAF1Q96HR8 494 aaKnown RBP8.2□□□□□ -1.1
TPM3-203ENST00000312970 CELF6Q96J87 481 aaKnown RBP8.2□□□□□ -1.1
TPM3-203ENST00000312970 SLC46A1Q96NT5 459 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 LRRC61Q9BV99 259 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 EDEM3Q9BZQ6 932 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 ATP13A3Q9H7F0 1226 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 THSD1Q9NS62 852 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 GPATCH2LQ9NWQ4 482 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 AIPL1Q9NZN9 384 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 GULP1Q9UBP9 304 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 SEPT3Q9UH03 358 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 PCSK1NQ9UHG2 260 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 SATB2Q9UPW6 733 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 ENTPD2Q9Y5L3 495 aa8.2□□□□□ -1.1
TPM3-203ENST00000312970 NBPF19A0A087WUL8 3843 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms