RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 RPL26P61254 145 aaKnown RBP16.79■□□□□ 0.28
CLCF1-201ENST00000312438 BCL2L1Q07817 233 aa16.79■□□□□ 0.28
CLCF1-201ENST00000312438 PTPRCAPQ14761 206 aa16.79■□□□□ 0.28
CLCF1-201ENST00000312438 TAF1BQ53T94 588 aaPredicted RBP16.79■□□□□ 0.28
CLCF1-201ENST00000312438 ATG16L1Q676U5 607 aa16.79■□□□□ 0.28
CLCF1-201ENST00000312438 OTUD6BQ8N6M0 293 aa16.79■□□□□ 0.28
CLCF1-201ENST00000312438 OR4L1Q8NH43 312 aa16.79■□□□□ 0.28
CLCF1-201ENST00000312438 E2F7Q96AV8 911 aa16.79■□□□□ 0.28
CLCF1-201ENST00000312438 ISG20Q96AZ6 181 aaKnown RBP16.79■□□□□ 0.28
CLCF1-201ENST00000312438 FBXO6Q9NRD1 293 aaPredicted RBP16.79■□□□□ 0.28
CLCF1-201ENST00000312438 EVLQ9UI08 416 aaPredicted RBP16.79■□□□□ 0.28
CLCF1-201ENST00000312438 RPL26L1Q9UNX3 145 aaKnown RBP16.79■□□□□ 0.28
CLCF1-201ENST00000312438 WNT6Q9Y6F9 365 aa16.79■□□□□ 0.28
CLCF1-201ENST00000312438 CCDC162PA2VCL2 907 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 CCL22O00626 93 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 AURKAO14965 403 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 CD3EAPO15446 510 aaKnown RBP16.78■□□□□ 0.28
CLCF1-201ENST00000312438 ZNF821O75541 412 aaPredicted RBP16.78■□□□□ 0.28
CLCF1-201ENST00000312438 PGLSO95336 258 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 S1PR4O95977 384 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 PROCP04070 461 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 SRCP12931 536 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 STMN1P16949 149 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 SAT1P21673 171 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 ABL2P42684 1182 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 GRIA4P48058 902 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 CLCN5P51795 746 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 ZNF140P52738 457 aaPredicted RBP16.78■□□□□ 0.28
CLCF1-201ENST00000312438 RAB10P61026 200 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 SNRPD1P62314 119 aaKnown RBP16.78■□□□□ 0.28
CLCF1-201ENST00000312438 SF3A3Q12874 501 aaKnown RBP eCLIP16.78■□□□□ 0.28
CLCF1-201ENST00000312438 IFT88Q13099 833 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 FUT11Q495W5 492 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 DGKKQ5KSL6 1271 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 ASTLQ6HA08 431 aaPredicted RBP16.78■□□□□ 0.28
CLCF1-201ENST00000312438 CGB2Q6NT52 195 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 CNSTQ6PJW8 725 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 OTOAQ7RTW8 1153 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 YTHDF3Q7Z739 585 aaKnown RBP16.78■□□□□ 0.28
CLCF1-201ENST00000312438 SDCCAG8Q86SQ7 713 aaPredicted RBP16.78■□□□□ 0.28
CLCF1-201ENST00000312438 CAMK1DQ8IU85 385 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 PLD6Q8N2A8 252 aaKnown RBP16.78■□□□□ 0.28
CLCF1-201ENST00000312438 GPATCH11Q8N954 259 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 OR2AP1Q8NGE2 309 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 ELMO2Q96JJ3 720 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 RPL10LQ96L21 214 aaKnown RBP16.78■□□□□ 0.28
CLCF1-201ENST00000312438 PLCD4Q9BRC7 762 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 SUDS3Q9H7L9 328 aaPredicted RBP16.78■□□□□ 0.28
CLCF1-201ENST00000312438 MAGEE1Q9HCI5 957 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 DZANK1Q9NVP4 752 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 SLC25A13Q9UJS0 675 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 ARL2BPQ9Y2Y0 163 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 ACOT9Q9Y305 439 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 DENND4CQ5VZ89 1909 aa16.78■□□□□ 0.28
CLCF1-201ENST00000312438 OR51F1A6NGY5 319 aa16.77■□□□□ 0.28
CLCF1-201ENST00000312438 TRAFD1O14545 582 aaPredicted RBP16.77■□□□□ 0.28
CLCF1-201ENST00000312438 HTRA2O43464 458 aaPredicted RBP16.77■□□□□ 0.28
CLCF1-201ENST00000312438 GSRP00390 522 aa16.77■□□□□ 0.28
CLCF1-201ENST00000312438 IL1BP01584 269 aa16.77■□□□□ 0.28
CLCF1-201ENST00000312438 CTSOP43234 321 aaPredicted RBP16.77■□□□□ 0.28
CLCF1-201ENST00000312438 SLC12A2P55011 1212 aa16.77■□□□□ 0.28
CLCF1-201ENST00000312438 IRX4P78413 519 aa16.77■□□□□ 0.28
CLCF1-201ENST00000312438 FASTKD1Q53R41 847 aaKnown RBP16.77■□□□□ 0.28
CLCF1-201ENST00000312438 SLC41A1Q8IVJ1 513 aa16.77■□□□□ 0.28
CLCF1-201ENST00000312438 MFSD6LQ8IWD5 586 aa16.77■□□□□ 0.28
CLCF1-201ENST00000312438 VN1R2Q8NFZ6 395 aa16.77■□□□□ 0.28
CLCF1-201ENST00000312438 OR4K2Q8NGD2 314 aa16.77■□□□□ 0.28
CLCF1-201ENST00000312438 GDPD5Q8WTR4 605 aa16.77■□□□□ 0.28
CLCF1-201ENST00000312438 PIH1D2Q8WWB5 315 aa16.77■□□□□ 0.28
CLCF1-201ENST00000312438 SCG3Q8WXD2 468 aaKnown RBP16.77■□□□□ 0.28
CLCF1-201ENST00000312438 PPP2R3CQ969Q6 453 aa16.77■□□□□ 0.28
CLCF1-201ENST00000312438 TSNARE1Q96NA8 513 aa16.77■□□□□ 0.28
CLCF1-201ENST00000312438 OMDQ99983 421 aa16.77■□□□□ 0.28
CLCF1-201ENST00000312438 MECRQ9BV79 373 aa16.77■□□□□ 0.28
CLCF1-201ENST00000312438 TSSK1BQ9BXA7 367 aa16.77■□□□□ 0.28
CLCF1-201ENST00000312438 CEP44Q9C0F1 390 aa16.77■□□□□ 0.28
CLCF1-201ENST00000312438 KLHL14Q9P2G3 628 aa16.77■□□□□ 0.28
CLCF1-201ENST00000312438 SOCS5O75159 536 aa16.77■□□□□ 0.27
CLCF1-201ENST00000312438 OGNP20774 298 aaKnown RBP16.77■□□□□ 0.27
CLCF1-201ENST00000312438 ECT2LQ008S8 904 aa16.77■□□□□ 0.27
CLCF1-201ENST00000312438 ZNF789Q5FWF6 425 aa16.77■□□□□ 0.27
CLCF1-201ENST00000312438 KIAA0907Q7Z7F0 614 aaPredicted RBP16.77■□□□□ 0.27
CLCF1-201ENST00000312438 OSCP1Q8WVF1 389 aa16.77■□□□□ 0.27
CLCF1-201ENST00000312438 MYO19Q96H55 970 aa16.77■□□□□ 0.27
CLCF1-201ENST00000312438 LRRC3BQ96PB8 259 aa16.77■□□□□ 0.27
CLCF1-201ENST00000312438 TNKS2Q9H2K2 1166 aa16.77■□□□□ 0.27
CLCF1-201ENST00000312438 ATP13A3Q9H7F0 1226 aa16.77■□□□□ 0.27
CLCF1-201ENST00000312438 NMRAL1Q9HBL8 299 aa16.77■□□□□ 0.27
CLCF1-201ENST00000312438 CATSPERZQ9NTU4 200 aa16.77■□□□□ 0.27
CLCF1-201ENST00000312438 ZNF358Q9NW07 568 aa16.77■□□□□ 0.27
CLCF1-201ENST00000312438 DUS2Q9NX74 493 aaKnown RBP16.77■□□□□ 0.27
CLCF1-201ENST00000312438 MARCH4Q9P2E8 410 aaPredicted RBP16.77■□□□□ 0.27
CLCF1-201ENST00000312438 PHGDHO43175 533 aaKnown RBP16.76■□□□□ 0.27
CLCF1-201ENST00000312438 KIAA0754O94854 1291 aa16.76■□□□□ 0.27
CLCF1-201ENST00000312438 SLC35E2BP0CK96 405 aa16.76■□□□□ 0.27
CLCF1-201ENST00000312438 FSHRP23945 695 aa16.76■□□□□ 0.27
CLCF1-201ENST00000312438 STK19P49842 368 aaPredicted RBP16.76■□□□□ 0.27
CLCF1-201ENST00000312438 TAS2R39P59534 338 aa16.76■□□□□ 0.27
CLCF1-201ENST00000312438 IRF9Q00978 393 aa16.76■□□□□ 0.27
CLCF1-201ENST00000312438 DHCR24Q15392 516 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms