RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 BTN3A3O00478 584 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 ALDH2P05091 517 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 PLEKHH3Q7Z736 793 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 TDRD1Q9BXT4 1180 aaKnown RBP13.22□□□□□ -0.29
SNED1-201ENST00000310397 MARCH2Q9P0N8 246 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 ANGPT4Q9Y264 503 aa13.22□□□□□ -0.29
SNED1-201ENST00000310397 TSPAN9O75954 239 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 TRIM40Q6P9F5 258 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 LRRC52Q8N7C0 313 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 MOSPD2Q8NHP6 518 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 HPS1Q92902 700 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 LGMNQ99538 433 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 OMDQ99983 421 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 ZYG11BQ9C0D3 744 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 VWA7Q9Y334 891 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 GRIN2DO15399 1336 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 URB1O60287 2271 aaKnown RBP13.21□□□□□ -0.29
SNED1-201ENST00000310397 LAMA4Q16363 1823 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 MST1RQ04912 1400 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 CES1P23141 567 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 PTGIRP43119 386 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 CRATP43155 626 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 LSM3P62310 102 aaKnown RBP13.21□□□□□ -0.29
SNED1-201ENST00000310397 PTSQ03393 145 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 HIPK1Q86Z02 1210 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 LRRC17Q8N6Y2 441 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 SENP8Q96LD8 212 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 OR52E6Q96RD3 313 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 OR6B1O95007 311 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 NFICP08651 508 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 PYDC2Q56P42 97 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 RNASEH2BQ5TBB1 312 aaKnown RBP13.21□□□□□ -0.29
SNED1-201ENST00000310397 PHACTR4Q8IZ21 702 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 EFCAB3Q8N7B9 438 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 RPRD1BQ9NQG5 326 aaKnown RBP13.21□□□□□ -0.29
SNED1-201ENST00000310397 USP20Q9Y2K6 914 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 SERPINA1P01009 418 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 FGF1P05230 155 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 BDNFP23560 247 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 PBLDP30039 288 aaPredicted RBP13.21□□□□□ -0.29
SNED1-201ENST00000310397 ALFQ53S48 1182 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 R3HCC1LQ7Z5L2 792 aaKnown RBP13.21□□□□□ -0.29
SNED1-201ENST00000310397 UXS1Q8NBZ7 420 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 ABHD16BQ9H3Z7 469 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 RMI1Q9H9A7 625 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 GTF2A1LQ9UNN4 478 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 ENTPD4Q9Y227 616 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 ARFGEF2Q9Y6D5 1785 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 LYPLA1O75608 230 aaPredicted RBP13.21□□□□□ -0.29
SNED1-201ENST00000310397 IPO13O94829 963 aaKnown RBP13.21□□□□□ -0.29
SNED1-201ENST00000310397 H6PDO95479 791 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 ROPN1LQ96C74 230 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 P2RY11Q96G91 374 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 CLPTM1LQ96KA5 538 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 EBF2Q9HAK2 575 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 ZFP14Q9HCL3 533 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 PSME2Q9UL46 239 aa13.21□□□□□ -0.29
SNED1-201ENST00000310397 ATP6AP2A0A1C7CYW4 349 aa13.21□□□□□ -0.3
SNED1-201ENST00000310397 ATP6AP2O75787 350 aa13.21□□□□□ -0.3
SNED1-201ENST00000310397 CATP04040 527 aaKnown RBP13.21□□□□□ -0.3
SNED1-201ENST00000310397 MTHFRP42898 656 aa13.21□□□□□ -0.3
SNED1-201ENST00000310397 SPIDRQ14159 915 aa13.21□□□□□ -0.3
SNED1-201ENST00000310397 PPP1R15BQ5SWA1 713 aa13.21□□□□□ -0.3
SNED1-201ENST00000310397 CPSF7Q8N684 471 aaKnown RBP13.21□□□□□ -0.3
SNED1-201ENST00000310397 CADM1Q9BY67 442 aaKnown RBP13.21□□□□□ -0.3
SNED1-201ENST00000310397 RHOBTB2Q9BYZ6 727 aa13.21□□□□□ -0.3
SNED1-201ENST00000310397 PCDH18Q9HCL0 1135 aa13.21□□□□□ -0.3
SNED1-201ENST00000310397 COG5Q9UP83 839 aa13.21□□□□□ -0.3
SNED1-201ENST00000310397 CYP2A6P11509 494 aaPredicted RBP13.21□□□□□ -0.3
SNED1-201ENST00000310397 ERCC2P18074 760 aa13.21□□□□□ -0.3
SNED1-201ENST00000310397 MTSS1LQ765P7 747 aa13.21□□□□□ -0.3
SNED1-201ENST00000310397 CUZD1Q86UP6 607 aa13.21□□□□□ -0.3
SNED1-201ENST00000310397 CPT1BQ92523 772 aa13.21□□□□□ -0.3
SNED1-201ENST00000310397 SLCO2A1Q92959 643 aa13.21□□□□□ -0.3
SNED1-201ENST00000310397 CENPNQ96H22 339 aaPredicted RBP13.21□□□□□ -0.3
SNED1-201ENST00000310397 UNC93B1Q9H1C4 597 aa13.21□□□□□ -0.3
SNED1-201ENST00000310397 IFT80Q9P2H3 777 aaPredicted RBP13.21□□□□□ -0.3
SNED1-201ENST00000310397 ADGRE2Q9UHX3 823 aa13.21□□□□□ -0.3
SNED1-201ENST00000310397 TTLL13PA6NNM8 815 aa13.2□□□□□ -0.3
SNED1-201ENST00000310397 RFXANKO14593 260 aa13.2□□□□□ -0.3
SNED1-201ENST00000310397 TAL1P17542 331 aaPredicted RBP13.2□□□□□ -0.3
SNED1-201ENST00000310397 SERPINA4P29622 427 aa13.2□□□□□ -0.3
SNED1-201ENST00000310397 FAM92BQ6ZTR7 304 aa13.2□□□□□ -0.3
SNED1-201ENST00000310397 MTIF3Q9H2K0 278 aaKnown RBP13.2□□□□□ -0.3
SNED1-201ENST00000310397 TRMT13Q9NUP7 481 aaKnown RBP13.2□□□□□ -0.3
SNED1-201ENST00000310397 ARIH1Q9Y4X5 557 aaPredicted RBP13.2□□□□□ -0.3
SNED1-201ENST00000310397 RICTORQ6R327 1708 aa13.2□□□□□ -0.3
SNED1-201ENST00000310397 TULP3O75386 442 aa13.2□□□□□ -0.3
SNED1-201ENST00000310397 TYSND1Q2T9J0 566 aa13.2□□□□□ -0.3
SNED1-201ENST00000310397 ZFP69Q49AA0 526 aa13.2□□□□□ -0.3
SNED1-201ENST00000310397 FNBP1LQ5T0N5 605 aa13.2□□□□□ -0.3
SNED1-201ENST00000310397 THAP5Q7Z6K1 395 aa13.2□□□□□ -0.3
SNED1-201ENST00000310397 ZNF513Q8N8E2 541 aaPredicted RBP13.2□□□□□ -0.3
SNED1-201ENST00000310397 ZNF557Q8N988 423 aaPredicted RBP13.2□□□□□ -0.3
SNED1-201ENST00000310397 PCSK9Q8NBP7 692 aaKnown RBP13.2□□□□□ -0.3
SNED1-201ENST00000310397 C2orf49Q9BVC5 232 aaPredicted RBP13.2□□□□□ -0.3
SNED1-201ENST00000310397 SLC39A8Q9C0K1 460 aa13.2□□□□□ -0.3
SNED1-201ENST00000310397 GRHL1Q9NZI5 618 aa13.2□□□□□ -0.3
SNED1-201ENST00000310397 AKAP7Q9P0M2 348 aaPredicted RBP13.2□□□□□ -0.3
SNED1-201ENST00000310397 VPS4AQ9UN37 437 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms