RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 ERMP1Q7Z2K6 904 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 LINC01465Q8N7H1 131 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 BEST2Q8NFU1 509 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 NT5C3BQ969T7 300 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 PBXIP1Q96AQ6 731 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 TCF12Q99081 682 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 KIFC1Q9BW19 673 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 AKTIPQ9H8T0 292 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 CNOT11Q9UKZ1 510 aaKnown RBP13.51□□□□□ -0.25
CCDC13-201ENST00000310232 SLC8A2Q9UPR5 921 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 A0A0J9YYE9 177 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 INPP4BO15327 924 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 GJB3O75712 270 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 APOA4P06727 396 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 NPR3P17342 541 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 MATN1P21941 496 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 SLC12A2P55011 1212 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 PPP1R8Q12972 351 aaKnown RBP13.51□□□□□ -0.25
CCDC13-201ENST00000310232 POLD3Q15054 466 aaPredicted RBP13.51□□□□□ -0.25
CCDC13-201ENST00000310232 SLC44A4Q53GD3 710 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 TECRLQ5HYJ1 363 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 PPP4R4Q6NUP7 873 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 KCTD8Q6ZWB6 473 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 CRYBG2Q8N1P7 616 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 TBC1D15Q8TC07 691 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 RDH11Q8TC12 318 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 RNF34Q969K3 372 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 TEX37Q96LM6 180 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 TBL1YQ9BQ87 522 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 DUSP16Q9BY84 665 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 PLGRKTQ9HBL7 147 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 CMTM6Q9NX76 183 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 IPO11Q9UI26 975 aaKnown RBP13.51□□□□□ -0.25
CCDC13-201ENST00000310232 FBXO5Q9UKT4 447 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 STAP1Q9ULZ2 295 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 ANKRD6Q9Y2G4 727 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 SH3GLB1Q9Y371 365 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 TRAF6Q9Y4K3 522 aa13.51□□□□□ -0.25
CCDC13-201ENST00000310232 LOC285556D6RIA3 1793 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 DHRS12A0PJE2 317 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 AXIN1O15169 862 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 IPO13O94829 963 aaKnown RBP13.5□□□□□ -0.25
CCDC13-201ENST00000310232 ATP5F1P24539 256 aaPredicted RBP13.5□□□□□ -0.25
CCDC13-201ENST00000310232 NPY2RP49146 381 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 SEMA3BQ13214 749 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 SQLEQ14534 574 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 HABP4Q5JVS0 413 aaKnown RBP13.5□□□□□ -0.25
CCDC13-201ENST00000310232 ANKRD34AQ69YU3 496 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 SLC15A3Q8IY34 581 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 HSFY1Q96LI6 401 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 MTG1Q9BT17 334 aaPredicted RBP13.5□□□□□ -0.25
CCDC13-201ENST00000310232 NFKBIZQ9BYH8 718 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 RCOR3Q9P2K3 495 aaPredicted RBP13.5□□□□□ -0.25
CCDC13-201ENST00000310232 RBPJLQ9UBG7 517 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 MID2Q9UJV3 735 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 KCTD3Q9Y597 815 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 NUP214P35658 2090 aaPredicted RBP13.5□□□□□ -0.25
CCDC13-201ENST00000310232 MYBPHLA2RUH7 354 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 SLCO1B7G3V0H7 640 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 H3BRB1 525 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 STAU1O95793 577 aaKnown RBP13.5□□□□□ -0.25
CCDC13-201ENST00000310232 CYP2C8P10632 490 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 PGFP49763 221 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 SNX16P57768 344 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 ZBED5Q49AG3 693 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 PAN2Q504Q3 1202 aaKnown RBP13.5□□□□□ -0.25
CCDC13-201ENST00000310232 PIWIL4Q7Z3Z4 852 aaKnown RBP13.5□□□□□ -0.25
CCDC13-201ENST00000310232 UNC93AQ86WB7 457 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 PARP8Q8N3A8 854 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 BPIFB6Q8NFQ5 453 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 HDAC10Q969S8 669 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 MRPL57Q9BQC6 102 aaKnown RBP13.5□□□□□ -0.25
CCDC13-201ENST00000310232 COLEC11Q9BWP8 271 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 DNAI2Q9GZS0 605 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 GSTO2Q9H4Y5 243 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 MEAF6Q9HAF1 191 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 UTP6Q9NYH9 597 aaKnown RBP13.5□□□□□ -0.25
CCDC13-201ENST00000310232 PDCD11Q14690 1871 aaKnown RBP13.5□□□□□ -0.25
CCDC13-201ENST00000310232 CLOCKO15516 846 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 MAN1A2O60476 641 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 HUS1O60921 280 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 BMP10O95393 424 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 LINC00032P0C843 101 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 PCNAP12004 261 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 DIO3P55073 304 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 CDKN2DP55273 166 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 ESRRGP62508 458 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 SH3BP2P78314 561 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 KCTD2Q14681 263 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 NAPEPLDQ6IQ20 393 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 DDIASQ8IXT1 998 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 ZMIZ2Q8NF64 920 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 IRGQQ8WZA9 623 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 HDAC11Q96DB2 347 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 UPF3AQ9H1J1 476 aaKnown RBP13.5□□□□□ -0.25
CCDC13-201ENST00000310232 WDCPQ9H6R7 721 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 CRTAC1Q9NQ79 661 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 PIN4Q9Y237 131 aaKnown RBP13.5□□□□□ -0.25
CCDC13-201ENST00000310232 PCDHGA4Q9Y5G9 962 aa13.5□□□□□ -0.25
CCDC13-201ENST00000310232 DGKBQ9Y6T7 804 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms