RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 SPATA20Q8TB22 786 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 AZIN2Q96A70 460 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 HOPXQ9BPY8 73 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 GTF2IRD1Q9UHL9 959 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 GLS2Q9UI32 602 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 SAMD4AQ9UPU9 718 aaKnown RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 OR10H1Q9Y4A9 318 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 MAFBQ9Y5Q3 323 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 FAM170AA1A519 330 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 RHPN2P1A8MT19 583 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 BBIP1A8MTZ0 92 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 TRIM49D1C9J1S8 452 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 FPGTO14772 594 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 TEX33O43247 280 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 IFNA16P05015 189 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 CBSLP0DN79 551 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 AKAP5P24588 427 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 CBSP35520 551 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 FAUP35544 74 aaKnown RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 CENPAP49450 140 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 SARSP49591 514 aaKnown RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PSMD7P51665 324 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 DMPKQ09013 629 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 EIF4HQ15056 248 aaKnown RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 SF1Q15637 639 aaKnown RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 SLC30A9Q6PML9 568 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ABHD15Q6UXT9 468 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 SPOCD1Q6ZMY3 1216 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 TMPRSS6Q8IU80 811 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 CPNE9Q8IYJ1 553 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PIWIL2Q8TC59 973 aaKnown RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 CENPIQ92674 756 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PNPLA2Q96AD5 504 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 TMEM125Q96AQ2 219 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 HHIPL1Q96JK4 782 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 GSDMCQ9BYG8 508 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 REEP1Q9H902 201 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 MIOSQ9NXC5 875 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 MS4A12Q9NXJ0 267 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 GMEB2Q9UKD1 530 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 RRP15Q9Y3B9 282 aaKnown RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 FAM86C2PA6NEL3 165 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 H0YGN5 161 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ZBTB22O15209 634 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PMM2O15305 246 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 LILRB3O75022 631 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 IL6P05231 212 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 FAM228BP0C875 321 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ATP5F1P24539 256 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 CCNCP24863 283 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 TOP3AQ13472 1001 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 LLGL1Q15334 1064 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 FAM214AQ32MH5 1076 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 GRIN3AQ8TCU5 1115 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ZFYVE19Q96K21 471 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 MFSD14AQ96MC6 490 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 RNF157Q96PX1 679 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 MIPEPQ99797 713 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 TRIM8Q9BZR9 551 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 TRIM2Q9C040 744 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 MIR1-1HGQ9H1L0 117 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ZDHHC6Q9H6R6 413 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ANKZF1Q9H8Y5 726 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 RAB9BQ9NP90 201 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 GPRC5CQ9NQ84 441 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 TLR9Q9NR96 1032 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PCDHB16Q9NRJ7 776 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 MAP10Q9P2G4 905 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 AGO1Q9UL18 857 aaKnown RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 A0A0B4J269 797 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 C1orf232A0A0U1RR37 186 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 E5RJQ4 531 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 FZD9O00144 591 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 DNALI1O14645 258 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ONECUT3O60422 494 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 TSPAN1O60635 241 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ALPIP09923 528 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 H2AFXP16104 143 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 FGFR4P22455 802 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ACTR1AP61163 376 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 CSNK2BP67870 215 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PPIDQ08752 370 aaKnown RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 NIPAL4Q0D2K0 466 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 DUSP4Q13115 394 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 GPM6BQ13491 265 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 DDX39BQ13838 428 aaKnown RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 TAF13Q15543 124 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 CHI3L2Q15782 390 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 TEX44Q53QW1 395 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 GJC2Q5T442 439 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ABHD13Q7L211 337 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PTAR1Q7Z6K3 402 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 GPR180Q86V85 440 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 NLRP14Q86W24 1093 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 GKN2Q86XP6 184 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 DEFB106AQ8N104 65 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 TMEM161BQ8NDZ6 487 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PSKH2Q96QS6 385 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PI4K2AQ9BTU6 479 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 C8orf33Q9H7E9 229 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms