RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 DPP7Q9UHL4 492 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 CLEC4EQ9ULY5 219 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 CHKBQ9Y259 395 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 ANKRD6Q9Y2G4 727 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 RRP15Q9Y3B9 282 aaKnown RBP11.94□□□□□ -0.5
TRIM40-205ENST00000307859 RAI2Q9Y5P3 530 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 ZNF318Q5VUA4 2279 aa11.94□□□□□ -0.5
TRIM40-205ENST00000307859 CCT8L1PA6NM43 557 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 KIAA0754O94854 1291 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 PAPLNO95428 1278 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 LEPRP48357 1165 aaKnown RBP11.93□□□□□ -0.5
TRIM40-205ENST00000307859 ZNF140P52738 457 aaPredicted RBP11.93□□□□□ -0.5
TRIM40-205ENST00000307859 RHOAP61586 193 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 AP1S1P61966 158 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 TRAF2Q12933 501 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 SLC12A1Q13621 1099 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 DLG2Q15700 870 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 ZNF77Q15935 545 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 PLEKHG6Q3KR16 790 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 CCDC153Q494R4 210 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 C16orf46Q6P387 395 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 TPGS1Q6ZTW0 290 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 RNF135Q8IUD6 432 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 CILP2Q8IUL8 1156 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 NUDCD3Q8IVD9 361 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 MFSD6LQ8IWD5 586 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 PLD6Q8N2A8 252 aaKnown RBP11.93□□□□□ -0.5
TRIM40-205ENST00000307859 CCDC63Q8NA47 563 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 TTC16Q8NEE8 873 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 HDAC10Q969S8 669 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 E2F7Q96AV8 911 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 ZNF707Q96C28 371 aaPredicted RBP11.93□□□□□ -0.5
TRIM40-205ENST00000307859 PLK2Q9NYY3 685 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.93□□□□□ -0.5
TRIM40-205ENST00000307859 KLHL14Q9P2G3 628 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 SLC39A10Q9ULF5 831 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 FCF1Q9Y324 198 aaKnown RBP11.93□□□□□ -0.5
TRIM40-205ENST00000307859 KCTD3Q9Y597 815 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 SPO11Q9Y5K1 396 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 HCFC2Q9Y5Z7 792 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 ARL5AQ9Y689 179 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 FAM95CA0A1B0GW59 222 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 FZD6O60353 706 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 RPP40O75818 363 aaKnown RBP11.93□□□□□ -0.5
TRIM40-205ENST00000307859 TGDSO95455 350 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 PRAMEF12O95522 483 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 CRTAMO95727 393 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 MT-CO1P00395 513 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 PENKP01210 267 aaPredicted RBP11.93□□□□□ -0.5
TRIM40-205ENST00000307859 PDHA1P08559 390 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 SLC35E2BP0CK96 405 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 COL6A2P12110 1019 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 CD70P32970 193 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 GMPRP36959 345 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 CSNK1DP48730 415 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 CLCN5P51795 746 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 PRAMEP78395 509 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 NTHL1P78549 312 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 SF3A3Q12874 501 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRIM40-205ENST00000307859 ILF2Q12905 390 aaKnown RBP11.93□□□□□ -0.5
TRIM40-205ENST00000307859 GPM6BQ13491 265 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 USP10Q14694 798 aaKnown RBP11.93□□□□□ -0.5
TRIM40-205ENST00000307859 PCLAFQ15004 111 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 TAF1AQ15573 450 aaPredicted RBP11.93□□□□□ -0.5
TRIM40-205ENST00000307859 ATG16L1Q676U5 607 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 METTL3Q86U44 580 aaKnown RBP11.93□□□□□ -0.5
TRIM40-205ENST00000307859 SLC41A1Q8IVJ1 513 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 GPR150Q8NGU9 434 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 ZNF398Q8TD17 642 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 C10orf82Q8WW14 230 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 DNAJC1Q96KC8 554 aaKnown RBP11.93□□□□□ -0.5
TRIM40-205ENST00000307859 C7orf26Q96N11 449 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 ADGRE3Q9BY15 652 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 KDM4CQ9H3R0 1056 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 CERS4Q9HA82 394 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 ABCB8Q9NUT2 735 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 NLE1Q9NVX2 485 aaPredicted RBP11.93□□□□□ -0.5
TRIM40-205ENST00000307859 INTS6Q9UL03 887 aaKnown RBP11.93□□□□□ -0.5
TRIM40-205ENST00000307859 PCDHGC4Q9Y5F7 938 aa11.93□□□□□ -0.5
TRIM40-205ENST00000307859 ZNF197O14709 1029 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 AURKAO14965 403 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 PER2O15055 1255 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 SNNO75324 88 aaPredicted RBP11.92□□□□□ -0.5
TRIM40-205ENST00000307859 HAUS5O94927 633 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 PIRTP0C851 137 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 NEFHP12036 1026 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 ALDH3A1P30838 453 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 CORO7P57737 925 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 RAB10P61026 200 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 IRF9Q00978 393 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 POU4F1Q01851 419 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 OCRLQ01968 901 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 SLC20A2Q08357 652 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 BST1Q10588 318 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 CHI3L2Q15782 390 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 LACTB2Q53H82 288 aaPredicted RBP11.92□□□□□ -0.5
TRIM40-205ENST00000307859 FASTKD1Q53R41 847 aaKnown RBP11.92□□□□□ -0.5
TRIM40-205ENST00000307859 TAF1BQ53T94 588 aaPredicted RBP11.92□□□□□ -0.5
TRIM40-205ENST00000307859 CES4AQ5XG92 561 aa11.92□□□□□ -0.5
TRIM40-205ENST00000307859 MBLAC2Q68D91 279 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms