RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 OR2AG2A6NM03 316 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 TIMP1P01033 207 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 ATP6V1B2P21281 511 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 TAS2R40P59535 323 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 CTBP1Q13363 440 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 TXNDC8Q6A555 127 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 LRRC8BQ6P9F7 803 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 NACC2Q96BF6 587 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 SIPA1Q96FS4 1042 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 P2RY11Q96G91 374 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 PRKAB1Q9Y478 270 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 INSIG1O15503 277 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 EPN2O95208 641 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 TNFP01375 233 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 TARSP26639 723 aaKnown RBP10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 PRKCIP41743 596 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 DEPDC1Q5TB30 811 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 ICE2Q659A1 982 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 TRPM8Q7Z2W7 1104 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 RASGRP3Q8IV61 690 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 ZCCHC9Q8N567 271 aaKnown RBP10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 C7orf43Q8WVR3 580 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 MRPL48Q96GC5 212 aaKnown RBP10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 ASB2Q96Q27 587 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 MAGEH1Q9H213 219 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 EBF3Q9H4W6 596 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 VTI1BQ9UEU0 232 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 WNT6Q9Y6F9 365 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 hCG_1818297A0A087WSY0 165 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 S100A3P33764 101 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 CCDC185Q8N715 623 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 GLOD4Q9HC38 313 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 CIDEBQ9UHD4 219 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 C9IYK1 514 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 HOXB2P14652 356 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 CRATP43155 626 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 SRSF11Q05519 484 aaKnown RBP10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 PRKG2Q13237 762 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 BIKQ13323 160 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 ZFP28Q8NHY6 868 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 CSPG4P5Q96PW8 444 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 SFXN1Q9H9B4 322 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 TDP1Q9NUW8 608 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 ATAD3AQ9NVI7 634 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 SNTNA6NMZ2 147 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 B4DGG1 531 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 HLA-DQA2P01906 255 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 SOD2P04179 222 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 LSP1P33241 339 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 EML3Q32P44 896 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 C17orf64Q86WR6 236 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 BTBD9Q96Q07 612 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 SEMA4AQ9H3S1 761 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 RAD21L1Q9H4I0 556 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 KCNE2Q9Y6J6 123 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 SNED1Q8TER0 1413 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 CHRNA1P02708 482 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 DSC2Q02487 901 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 C16orf62Q7Z3J2 963 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 TMPRSS11BQ86T26 416 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 SRLQ86TD4 932 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 AHI1Q8N157 1196 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 SPATA6LQ8N4H0 392 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 OR52K2Q8NGK3 314 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 ADI1Q9BV57 179 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 COMMD8Q9NX08 183 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 ALBP02768 609 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 CYP4F2P78329 520 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 FASTKQ14296 549 aaKnown RBP10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 POLNQ7Z5Q5 900 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 TTC29Q8NA56 475 aaPredicted RBP10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 TMEM120AQ9BXJ8 343 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 FBXL12Q9NXK8 326 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 WRAP73Q9P2S5 460 aaPredicted RBP10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 MRPS33Q9Y291 106 aaKnown RBP10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 PCDHGC4Q9Y5F7 938 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 C16orf96A6NNT2 1141 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 FAM220BPB1ANY3 271 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 TRIM13O60858 407 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 KCNA3P22001 575 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 MAPKAPK2P49137 400 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 UBE3AQ05086 875 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 VAC14Q08AM6 782 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 TRAF2Q12933 501 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 TMEM164Q5U3C3 297 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 C16orf46Q6P387 395 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 PROX1Q92786 737 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 ACDQ96AP0 544 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 LRRC39Q96DD0 335 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 OSBPL10Q9BXB5 764 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 OSER1Q9NX31 292 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 SUCOQ9UBS9 1254 aaKnown RBP10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 INSL5Q9Y5Q6 135 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 MFSD11O43934 449 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 CMPK1P30085 196 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 PEX19P40855 299 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 TBX2Q13207 712 aaPredicted RBP10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 FGD3Q5JSP0 725 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 RNF19BQ6ZMZ0 732 aa10.73□□□□□ -0.69
SYNPO2-201ENST00000307142 RIPOR1Q6ZS17 1223 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms